Hb_008695_020

Information

Type -
Description -
Location Contig8695: 9876-14868
Sequence    

Annotation

kegg
ID pop:POPTR_0005s16140g
description POPTRDRAFT_1078405; putative phosphatidylinositol-4-phosphate 5-kinase mRNA family protein
nr
ID XP_012078161.1
description PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1 [Jatropha curcas]
swissprot
ID Q56YP2
description Phosphatidylinositol 4-phosphate 5-kinase 1 OS=Arabidopsis thaliana GN=PIP5K1 PE=1 SV=1
trembl
ID A0A067K9J1
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12044 PE=4 SV=1
Gene Ontology
ID GO:0016308
description phosphatidylinositol 4-phosphate 5-kinase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61090: 10089-14335
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008695_020 0.0 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1 [Jatropha curcas]
2 Hb_007007_060 0.062740752 - - PREDICTED: peroxisome biogenesis protein 16-like isoform X1 [Jatropha curcas]
3 Hb_009646_030 0.0731274943 - - conserved hypothetical protein [Ricinus communis]
4 Hb_000107_400 0.0747082231 - - PREDICTED: pentatricopeptide repeat-containing protein At3g46870-like [Jatropha curcas]
5 Hb_005993_050 0.076594467 - - Protein AFR, putative [Ricinus communis]
6 Hb_007904_120 0.0822825382 - - PREDICTED: ALBINO3-like protein 1, chloroplastic [Jatropha curcas]
7 Hb_004055_150 0.0850790321 - - conserved hypothetical protein [Ricinus communis]
8 Hb_116349_030 0.0854874289 - - PREDICTED: zinc finger MYND domain-containing protein 15 isoform X3 [Jatropha curcas]
9 Hb_000009_090 0.0865282685 transcription factor TF Family: bZIP G-box-binding factor, putative [Ricinus communis]
10 Hb_000679_130 0.0879098573 - - dead box ATP-dependent RNA helicase, putative [Ricinus communis]
11 Hb_000665_160 0.0880901548 - - PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform X1 [Jatropha curcas]
12 Hb_001599_030 0.0892988324 - - PREDICTED: valine--tRNA ligase [Jatropha curcas]
13 Hb_000574_440 0.0898127447 - - PREDICTED: uncharacterized protein LOC105634833 [Jatropha curcas]
14 Hb_003794_010 0.0901691483 - - PREDICTED: uncharacterized protein LOC105641013 [Jatropha curcas]
15 Hb_001001_080 0.0904123083 - - PREDICTED: uncharacterized protein LOC105633661 [Jatropha curcas]
16 Hb_001377_320 0.0915934273 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH13-like [Jatropha curcas]
17 Hb_003994_200 0.0926562035 - - PREDICTED: uncharacterized protein LOC105646142 [Jatropha curcas]
18 Hb_000160_210 0.0940028044 - - conserved hypothetical protein [Ricinus communis]
19 Hb_002997_080 0.0946512874 - - PREDICTED: uncharacterized protein LOC105631115 [Jatropha curcas]
20 Hb_000794_050 0.0946782 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 12 [Jatropha curcas]

Gene co-expression network

sample Hb_008695_020 Hb_008695_020 Hb_007007_060 Hb_007007_060 Hb_008695_020--Hb_007007_060 Hb_009646_030 Hb_009646_030 Hb_008695_020--Hb_009646_030 Hb_000107_400 Hb_000107_400 Hb_008695_020--Hb_000107_400 Hb_005993_050 Hb_005993_050 Hb_008695_020--Hb_005993_050 Hb_007904_120 Hb_007904_120 Hb_008695_020--Hb_007904_120 Hb_004055_150 Hb_004055_150 Hb_008695_020--Hb_004055_150 Hb_000160_210 Hb_000160_210 Hb_007007_060--Hb_000160_210 Hb_000260_100 Hb_000260_100 Hb_007007_060--Hb_000260_100 Hb_006960_050 Hb_006960_050 Hb_007007_060--Hb_006960_050 Hb_007007_060--Hb_004055_150 Hb_033720_010 Hb_033720_010 Hb_007007_060--Hb_033720_010 Hb_006620_020 Hb_006620_020 Hb_009646_030--Hb_006620_020 Hb_009646_030--Hb_004055_150 Hb_001926_030 Hb_001926_030 Hb_009646_030--Hb_001926_030 Hb_000879_200 Hb_000879_200 Hb_009646_030--Hb_000879_200 Hb_002997_080 Hb_002997_080 Hb_009646_030--Hb_002997_080 Hb_002078_020 Hb_002078_020 Hb_009646_030--Hb_002078_020 Hb_002749_110 Hb_002749_110 Hb_000107_400--Hb_002749_110 Hb_116349_030 Hb_116349_030 Hb_000107_400--Hb_116349_030 Hb_000574_440 Hb_000574_440 Hb_000107_400--Hb_000574_440 Hb_000849_020 Hb_000849_020 Hb_000107_400--Hb_000849_020 Hb_003018_130 Hb_003018_130 Hb_000107_400--Hb_003018_130 Hb_000029_050 Hb_000029_050 Hb_005993_050--Hb_000029_050 Hb_138596_010 Hb_138596_010 Hb_005993_050--Hb_138596_010 Hb_005993_050--Hb_004055_150 Hb_003609_030 Hb_003609_030 Hb_005993_050--Hb_003609_030 Hb_003680_150 Hb_003680_150 Hb_005993_050--Hb_003680_150 Hb_000853_230 Hb_000853_230 Hb_005993_050--Hb_000853_230 Hb_001085_250 Hb_001085_250 Hb_007904_120--Hb_001085_250 Hb_001377_320 Hb_001377_320 Hb_007904_120--Hb_001377_320 Hb_007262_020 Hb_007262_020 Hb_007904_120--Hb_007262_020 Hb_007904_120--Hb_007007_060 Hb_012098_110 Hb_012098_110 Hb_007904_120--Hb_012098_110 Hb_002022_060 Hb_002022_060 Hb_007904_120--Hb_002022_060 Hb_004055_150--Hb_001926_030 Hb_002686_250 Hb_002686_250 Hb_004055_150--Hb_002686_250 Hb_004055_150--Hb_000853_230 Hb_004055_150--Hb_006620_020 Hb_004055_150--Hb_006960_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.3449 7.33761 9.28111 5.64466 14.5956 10.8109
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.37438 6.04597 9.74984 5.2474 9.71288

CAGE analysis