Hb_008695_120

Information

Type transcription factor
Description TF Family: C2H2
Location Contig8695: 103552-111058
Sequence    

Annotation

kegg
ID rcu:RCOM_1032900
description myst histone acetyltransferase, putative (EC:2.3.1.48)
nr
ID XP_012078147.1
description PREDICTED: MYST-like histone acetyltransferase 2 [Jatropha curcas]
swissprot
ID Q9LXD7
description Histone acetyltransferase of the MYST family 2 OS=Arabidopsis thaliana GN=HAM2 PE=1 SV=1
trembl
ID A0A067KCM9
description Histone acetyltransferase OS=Jatropha curcas GN=JCGZ_12030 PE=3 SV=1
Gene Ontology
ID GO:0004402
description myst-like histone acetyltransferase 2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61103: 103609-111073
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008695_120 0.0 transcription factor TF Family: C2H2 PREDICTED: MYST-like histone acetyltransferase 2 [Jatropha curcas]
2 Hb_003581_120 0.0496263389 - - PREDICTED: uncharacterized protein LOC105649777 [Jatropha curcas]
3 Hb_031091_010 0.058455552 - - crooked neck protein, putative [Ricinus communis]
4 Hb_000322_100 0.0623206816 - - PREDICTED: casein kinase I isoform delta-like [Jatropha curcas]
5 Hb_001019_170 0.063772905 - - PREDICTED: uncharacterized protein LOC105639322 [Jatropha curcas]
6 Hb_002400_180 0.071924639 - - conserved hypothetical protein [Ricinus communis]
7 Hb_002942_160 0.0736699749 - - PREDICTED: coiled-coil domain-containing protein SCD2 [Jatropha curcas]
8 Hb_002044_060 0.0737701383 - - elongation factor ts, putative [Ricinus communis]
9 Hb_009265_080 0.0749216724 - - PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]
10 Hb_005532_050 0.0750405852 - - PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Jatropha curcas]
11 Hb_007336_020 0.075220935 - - Mannose-P-dolichol utilization defect 1 protein, putative [Ricinus communis]
12 Hb_002716_140 0.0754618729 - - PREDICTED: probable VAMP-like protein At1g33475 [Jatropha curcas]
13 Hb_002304_090 0.0756341654 - - PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Jatropha curcas]
14 Hb_008714_020 0.0759040594 - - PREDICTED: GTP-binding protein SAR1A-like [Jatropha curcas]
15 Hb_011942_080 0.0767687353 - - PREDICTED: ubiquitin receptor RAD23b-like [Gossypium raimondii]
16 Hb_002475_160 0.0778175137 - - PREDICTED: 60S ribosomal export protein NMD3 [Jatropha curcas]
17 Hb_000034_050 0.0781107922 - - PREDICTED: uncharacterized protein LOC105637912 [Jatropha curcas]
18 Hb_007590_080 0.0783243952 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Malus domestica]
19 Hb_000424_010 0.0785785586 - - PREDICTED: F-box/LRR-repeat protein 15 isoform X1 [Jatropha curcas]
20 Hb_003935_030 0.0786861032 - - PREDICTED: 14-3-3-like protein GF14 kappa isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_008695_120 Hb_008695_120 Hb_003581_120 Hb_003581_120 Hb_008695_120--Hb_003581_120 Hb_031091_010 Hb_031091_010 Hb_008695_120--Hb_031091_010 Hb_000322_100 Hb_000322_100 Hb_008695_120--Hb_000322_100 Hb_001019_170 Hb_001019_170 Hb_008695_120--Hb_001019_170 Hb_002400_180 Hb_002400_180 Hb_008695_120--Hb_002400_180 Hb_002942_160 Hb_002942_160 Hb_008695_120--Hb_002942_160 Hb_003581_120--Hb_002400_180 Hb_002097_090 Hb_002097_090 Hb_003581_120--Hb_002097_090 Hb_000803_300 Hb_000803_300 Hb_003581_120--Hb_000803_300 Hb_003581_120--Hb_001019_170 Hb_000034_050 Hb_000034_050 Hb_003581_120--Hb_000034_050 Hb_001616_090 Hb_001616_090 Hb_031091_010--Hb_001616_090 Hb_002716_140 Hb_002716_140 Hb_031091_010--Hb_002716_140 Hb_031091_010--Hb_000322_100 Hb_031091_010--Hb_003581_120 Hb_007643_050 Hb_007643_050 Hb_031091_010--Hb_007643_050 Hb_000322_100--Hb_000034_050 Hb_007336_020 Hb_007336_020 Hb_000322_100--Hb_007336_020 Hb_008864_110 Hb_008864_110 Hb_000322_100--Hb_008864_110 Hb_006951_020 Hb_006951_020 Hb_000322_100--Hb_006951_020 Hb_008714_020 Hb_008714_020 Hb_001019_170--Hb_008714_020 Hb_001019_170--Hb_002400_180 Hb_000076_080 Hb_000076_080 Hb_001019_170--Hb_000076_080 Hb_006913_040 Hb_006913_040 Hb_001019_170--Hb_006913_040 Hb_000684_420 Hb_000684_420 Hb_002400_180--Hb_000684_420 Hb_004678_060 Hb_004678_060 Hb_002400_180--Hb_004678_060 Hb_002400_180--Hb_000803_300 Hb_002400_180--Hb_002097_090 Hb_002400_180--Hb_000034_050 Hb_010931_080 Hb_010931_080 Hb_002942_160--Hb_010931_080 Hb_002044_060 Hb_002044_060 Hb_002942_160--Hb_002044_060 Hb_004370_030 Hb_004370_030 Hb_002942_160--Hb_004370_030 Hb_000789_080 Hb_000789_080 Hb_002942_160--Hb_000789_080 Hb_000364_080 Hb_000364_080 Hb_002942_160--Hb_000364_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
67.4005 48.4566 26.6019 30.4483 75.3395 93.4736
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
56.3121 30.7685 33.3222 26.9413 20.3657

CAGE analysis