Hb_008695_130

Information

Type -
Description -
Location Contig8695: 112455-113057
Sequence    

Annotation

kegg
ID rcu:RCOM_1032910
description hypothetical protein
nr
ID XP_002513839.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9RJC0
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1032910 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008695_130 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_001221_480 0.1230988149 - - metal ion binding protein, putative [Ricinus communis]
3 Hb_002750_010 0.1311432216 transcription factor TF Family: WRKY WRKY transcription factor 15 family protein [Populus trichocarpa]
4 Hb_003987_030 0.1314063724 - - PREDICTED: cytochrome P450 83B1-like [Jatropha curcas]
5 Hb_001454_410 0.1328176132 - - PREDICTED: uncharacterized protein LOC105643453 [Jatropha curcas]
6 Hb_003807_020 0.1365088429 - - PREDICTED: subtilisin-like protease SBT2.5 [Jatropha curcas]
7 Hb_000335_050 0.1413173001 - - PREDICTED: CASP-like protein 4A1 isoform X1 [Jatropha curcas]
8 Hb_004447_020 0.1431299113 - - carbohydrate binding protein, putative [Ricinus communis]
9 Hb_004129_110 0.1471073387 - - Calcium-activated outward-rectifying potassium channel, putative [Ricinus communis]
10 Hb_000227_370 0.1477178692 - - sugar transporter, putative [Ricinus communis]
11 Hb_004452_080 0.150412888 - - ring finger protein, putative [Ricinus communis]
12 Hb_000649_030 0.1512634903 - - scab resistance family protein [Populus trichocarpa]
13 Hb_000009_130 0.1514987635 - - hypothetical protein POPTR_0007s12410g [Populus trichocarpa]
14 Hb_006711_020 0.1517549273 - - hypothetical protein JCGZ_07258 [Jatropha curcas]
15 Hb_000407_080 0.1524265023 - - 1-aminocyclopropane-1-carboxylate oxidase [Hevea brasiliensis]
16 Hb_002236_070 0.1532425214 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH36-like [Jatropha curcas]
17 Hb_000236_050 0.1547009371 - - phosphate transporter [Manihot esculenta]
18 Hb_000029_370 0.1553982193 - - multidrug resistance pump, putative [Ricinus communis]
19 Hb_010174_170 0.1564398099 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Jatropha curcas]
20 Hb_008705_040 0.159330187 - - PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Jatropha curcas]

Gene co-expression network

sample Hb_008695_130 Hb_008695_130 Hb_001221_480 Hb_001221_480 Hb_008695_130--Hb_001221_480 Hb_002750_010 Hb_002750_010 Hb_008695_130--Hb_002750_010 Hb_003987_030 Hb_003987_030 Hb_008695_130--Hb_003987_030 Hb_001454_410 Hb_001454_410 Hb_008695_130--Hb_001454_410 Hb_003807_020 Hb_003807_020 Hb_008695_130--Hb_003807_020 Hb_000335_050 Hb_000335_050 Hb_008695_130--Hb_000335_050 Hb_001221_480--Hb_003807_020 Hb_000649_030 Hb_000649_030 Hb_001221_480--Hb_000649_030 Hb_004447_020 Hb_004447_020 Hb_001221_480--Hb_004447_020 Hb_111582_010 Hb_111582_010 Hb_001221_480--Hb_111582_010 Hb_001221_480--Hb_000335_050 Hb_001221_480--Hb_001454_410 Hb_002750_010--Hb_003987_030 Hb_000236_050 Hb_000236_050 Hb_002750_010--Hb_000236_050 Hb_002551_090 Hb_002551_090 Hb_002750_010--Hb_002551_090 Hb_000934_290 Hb_000934_290 Hb_002750_010--Hb_000934_290 Hb_009581_050 Hb_009581_050 Hb_002750_010--Hb_009581_050 Hb_003987_030--Hb_000236_050 Hb_000034_030 Hb_000034_030 Hb_003987_030--Hb_000034_030 Hb_006711_020 Hb_006711_020 Hb_003987_030--Hb_006711_020 Hb_005237_040 Hb_005237_040 Hb_003987_030--Hb_005237_040 Hb_000181_160 Hb_000181_160 Hb_001454_410--Hb_000181_160 Hb_003453_030 Hb_003453_030 Hb_001454_410--Hb_003453_030 Hb_001454_410--Hb_003807_020 Hb_001408_050 Hb_001408_050 Hb_001454_410--Hb_001408_050 Hb_003807_020--Hb_000335_050 Hb_000579_180 Hb_000579_180 Hb_003807_020--Hb_000579_180 Hb_003807_020--Hb_004447_020 Hb_002007_140 Hb_002007_140 Hb_003807_020--Hb_002007_140 Hb_003807_020--Hb_009581_050 Hb_002391_350 Hb_002391_350 Hb_003807_020--Hb_002391_350 Hb_010926_010 Hb_010926_010 Hb_000335_050--Hb_010926_010 Hb_000335_050--Hb_009581_050 Hb_000335_050--Hb_002391_350 Hb_000335_050--Hb_000579_180 Hb_000335_050--Hb_004447_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.96139 0.842489 1.24324 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.157546 0 3.64932 0.152566

CAGE analysis