Hb_008695_150

Information

Type -
Description -
Location Contig8695: 127477-131793
Sequence    

Annotation

kegg
ID rcu:RCOM_1033040
description Beta-1,3-galactosyltransferase sqv-2, putative (EC:2.4.1.134)
nr
ID XP_012078142.1
description PREDICTED: beta-1,3-galactosyltransferase 7 isoform X1 [Jatropha curcas]
swissprot
ID Q6NQB7
description Beta-1,3-galactosyltransferase 7 OS=Arabidopsis thaliana GN=B3GALT7 PE=2 SV=1
trembl
ID A0A067KKF9
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12027 PE=4 SV=1
Gene Ontology
ID GO:0005794
description beta- -galactosyltransferase 7 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61109: 127836-131654 , PASA_asmbl_61110: 129512-129974
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008695_150 0.0 - - PREDICTED: beta-1,3-galactosyltransferase 7 isoform X1 [Jatropha curcas]
2 Hb_000042_380 0.0988999992 - - PREDICTED: uncharacterized membrane protein At3g27390 [Jatropha curcas]
3 Hb_005485_070 0.1007535777 - - 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase, putative [Ricinus communis]
4 Hb_005333_080 0.1128546785 - - conserved hypothetical protein [Ricinus communis]
5 Hb_000116_240 0.1165471297 transcription factor TF Family: HB homeobox-leucine zipper family protein [Populus trichocarpa]
6 Hb_001439_010 0.1165910875 - - PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Jatropha curcas]
7 Hb_000731_210 0.1296555619 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001277_400 0.1302563475 transcription factor TF Family: Tify PREDICTED: protein TIFY 4B isoform X3 [Jatropha curcas]
9 Hb_010672_050 0.1309272492 - - PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X3 [Jatropha curcas]
10 Hb_004545_070 0.1352079841 - - PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Jatropha curcas]
11 Hb_003879_020 0.1355799088 - - PREDICTED: MATE efflux family protein 1-like [Jatropha curcas]
12 Hb_007575_030 0.1384922472 - - PREDICTED: protein RCC2 homolog [Jatropha curcas]
13 Hb_005545_020 0.138619257 - - endo beta n-acetylglucosaminidase, putative [Ricinus communis]
14 Hb_000318_170 0.1417311984 - - N-acetyl-gamma-glutamyl-phosphate reductase, putative [Ricinus communis]
15 Hb_005663_090 0.1422026441 - - PREDICTED: alcohol dehydrogenase-like 7 [Jatropha curcas]
16 Hb_000590_070 0.1454217843 - - PREDICTED: beta-hexosaminidase 1 [Jatropha curcas]
17 Hb_004883_020 0.1469913713 - - PREDICTED: uncharacterized protein LOC105647351 [Jatropha curcas]
18 Hb_004079_100 0.1478523946 - - PREDICTED: uncharacterized protein LOC105637705 [Jatropha curcas]
19 Hb_143766_080 0.148942539 - - PREDICTED: uncharacterized protein LOC105637797 isoform X1 [Jatropha curcas]
20 Hb_002739_040 0.1494785784 - - PREDICTED: isocitrate dehydrogenase [NADP] [Jatropha curcas]

Gene co-expression network

sample Hb_008695_150 Hb_008695_150 Hb_000042_380 Hb_000042_380 Hb_008695_150--Hb_000042_380 Hb_005485_070 Hb_005485_070 Hb_008695_150--Hb_005485_070 Hb_005333_080 Hb_005333_080 Hb_008695_150--Hb_005333_080 Hb_000116_240 Hb_000116_240 Hb_008695_150--Hb_000116_240 Hb_001439_010 Hb_001439_010 Hb_008695_150--Hb_001439_010 Hb_000731_210 Hb_000731_210 Hb_008695_150--Hb_000731_210 Hb_005545_020 Hb_005545_020 Hb_000042_380--Hb_005545_020 Hb_007575_030 Hb_007575_030 Hb_000042_380--Hb_007575_030 Hb_001277_400 Hb_001277_400 Hb_000042_380--Hb_001277_400 Hb_005568_050 Hb_005568_050 Hb_000042_380--Hb_005568_050 Hb_004883_020 Hb_004883_020 Hb_000042_380--Hb_004883_020 Hb_005485_070--Hb_000116_240 Hb_000318_170 Hb_000318_170 Hb_005485_070--Hb_000318_170 Hb_000590_070 Hb_000590_070 Hb_005485_070--Hb_000590_070 Hb_005485_070--Hb_001277_400 Hb_003106_110 Hb_003106_110 Hb_005485_070--Hb_003106_110 Hb_010672_050 Hb_010672_050 Hb_005333_080--Hb_010672_050 Hb_012760_090 Hb_012760_090 Hb_005333_080--Hb_012760_090 Hb_158092_040 Hb_158092_040 Hb_005333_080--Hb_158092_040 Hb_005333_080--Hb_000116_240 Hb_001019_160 Hb_001019_160 Hb_005333_080--Hb_001019_160 Hb_000309_030 Hb_000309_030 Hb_000116_240--Hb_000309_030 Hb_000116_240--Hb_000590_070 Hb_000116_240--Hb_001277_400 Hb_000261_310 Hb_000261_310 Hb_000116_240--Hb_000261_310 Hb_000116_240--Hb_000318_170 Hb_006469_090 Hb_006469_090 Hb_001439_010--Hb_006469_090 Hb_000680_070 Hb_000680_070 Hb_001439_010--Hb_000680_070 Hb_005663_090 Hb_005663_090 Hb_001439_010--Hb_005663_090 Hb_003607_140 Hb_003607_140 Hb_001439_010--Hb_003607_140 Hb_003879_020 Hb_003879_020 Hb_001439_010--Hb_003879_020 Hb_004032_110 Hb_004032_110 Hb_001439_010--Hb_004032_110 Hb_002301_370 Hb_002301_370 Hb_000731_210--Hb_002301_370 Hb_000024_130 Hb_000024_130 Hb_000731_210--Hb_000024_130 Hb_001048_100 Hb_001048_100 Hb_000731_210--Hb_001048_100 Hb_031385_010 Hb_031385_010 Hb_000731_210--Hb_031385_010 Hb_000731_210--Hb_000318_170 Hb_003106_230 Hb_003106_230 Hb_000731_210--Hb_003106_230
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.231004 2.39573 9.00223 10.0067 0.419407 0.485572
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.364708 0.594392 0.735723 10.3697 5.60812

CAGE analysis