Hb_008695_160

Information

Type -
Description -
Location Contig8695: 133282-140938
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008695_160 0.0 - - -
2 Hb_027472_090 0.1542458034 - - -
3 Hb_001153_200 0.1637849871 - - PREDICTED: calcium-dependent protein kinase 26 isoform X1 [Jatropha curcas]
4 Hb_000381_080 0.1755222815 transcription factor TF Family: SNF2 PREDICTED: DNA repair protein RAD16 [Jatropha curcas]
5 Hb_002471_170 0.1773640574 - - -
6 Hb_012305_060 0.1810102061 - - protein translocase, putative [Ricinus communis]
7 Hb_000089_130 0.1831239948 - - mitochondrial ribosomal protein S16, putative [Ricinus communis]
8 Hb_002821_010 0.1842082235 - - PREDICTED: nucleolar protein 16 [Jatropha curcas]
9 Hb_000510_100 0.185305324 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
10 Hb_001999_120 0.1871879553 - - PREDICTED: pleckstrin homology domain-containing protein 1 [Jatropha curcas]
11 Hb_000788_120 0.1889244057 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RPS2-like [Eucalyptus grandis]
12 Hb_003185_020 0.1928124194 transcription factor TF Family: GNAT PREDICTED: N-alpha-acetyltransferase 50 [Jatropha curcas]
13 Hb_005690_020 0.1932730948 - - hypothetical protein POPTR_0006s08200g [Populus trichocarpa]
14 Hb_002259_030 0.1937544116 - - conserved hypothetical protein [Ricinus communis]
15 Hb_000442_100 0.1945540385 - - PREDICTED: staphylococcal-like nuclease CAN2 [Jatropha curcas]
16 Hb_142898_010 0.1960047411 - - conserved hypothetical protein [Ricinus communis]
17 Hb_005618_040 0.1964936859 - - -
18 Hb_004072_010 0.1970405096 transcription factor TF Family: NF-YB PREDICTED: nuclear transcription factor Y subunit B-1-like isoform X1 [Jatropha curcas]
19 Hb_157854_010 0.1971988835 - - PREDICTED: myb family transcription factor APL-like [Jatropha curcas]
20 Hb_006570_020 0.1973620859 - - -

Gene co-expression network

sample Hb_008695_160 Hb_008695_160 Hb_027472_090 Hb_027472_090 Hb_008695_160--Hb_027472_090 Hb_001153_200 Hb_001153_200 Hb_008695_160--Hb_001153_200 Hb_000381_080 Hb_000381_080 Hb_008695_160--Hb_000381_080 Hb_002471_170 Hb_002471_170 Hb_008695_160--Hb_002471_170 Hb_012305_060 Hb_012305_060 Hb_008695_160--Hb_012305_060 Hb_000089_130 Hb_000089_130 Hb_008695_160--Hb_000089_130 Hb_027472_090--Hb_012305_060 Hb_027472_090--Hb_002471_170 Hb_004545_160 Hb_004545_160 Hb_027472_090--Hb_004545_160 Hb_003185_020 Hb_003185_020 Hb_027472_090--Hb_003185_020 Hb_007625_020 Hb_007625_020 Hb_027472_090--Hb_007625_020 Hb_000008_320 Hb_000008_320 Hb_027472_090--Hb_000008_320 Hb_005618_040 Hb_005618_040 Hb_001153_200--Hb_005618_040 Hb_007666_020 Hb_007666_020 Hb_001153_200--Hb_007666_020 Hb_025087_010 Hb_025087_010 Hb_001153_200--Hb_025087_010 Hb_009026_050 Hb_009026_050 Hb_001153_200--Hb_009026_050 Hb_002471_160 Hb_002471_160 Hb_001153_200--Hb_002471_160 Hb_000934_030 Hb_000934_030 Hb_001153_200--Hb_000934_030 Hb_000442_100 Hb_000442_100 Hb_000381_080--Hb_000442_100 Hb_120221_010 Hb_120221_010 Hb_000381_080--Hb_120221_010 Hb_000995_050 Hb_000995_050 Hb_000381_080--Hb_000995_050 Hb_002821_010 Hb_002821_010 Hb_000381_080--Hb_002821_010 Hb_084934_010 Hb_084934_010 Hb_000381_080--Hb_084934_010 Hb_000156_130 Hb_000156_130 Hb_000381_080--Hb_000156_130 Hb_180333_010 Hb_180333_010 Hb_002471_170--Hb_180333_010 Hb_000788_120 Hb_000788_120 Hb_002471_170--Hb_000788_120 Hb_003687_140 Hb_003687_140 Hb_002471_170--Hb_003687_140 Hb_000521_150 Hb_000521_150 Hb_002471_170--Hb_000521_150 Hb_000926_290 Hb_000926_290 Hb_002471_170--Hb_000926_290 Hb_012305_060--Hb_004545_160 Hb_000193_230 Hb_000193_230 Hb_012305_060--Hb_000193_230 Hb_012305_060--Hb_007625_020 Hb_000078_030 Hb_000078_030 Hb_012305_060--Hb_000078_030 Hb_000284_010 Hb_000284_010 Hb_012305_060--Hb_000284_010 Hb_007451_030 Hb_007451_030 Hb_012305_060--Hb_007451_030 Hb_001454_330 Hb_001454_330 Hb_000089_130--Hb_001454_330 Hb_000089_130--Hb_009026_050 Hb_000563_590 Hb_000563_590 Hb_000089_130--Hb_000563_590 Hb_011139_020 Hb_011139_020 Hb_000089_130--Hb_011139_020 Hb_000152_430 Hb_000152_430 Hb_000089_130--Hb_000152_430 Hb_001019_090 Hb_001019_090 Hb_000089_130--Hb_001019_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.63615 0.37256 0.113809 0 0.27958 1.07287
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.34304 0.84483 0.573275 0.106847 0

CAGE analysis