Hb_008705_030

Information

Type -
Description -
Location Contig8705: 20081-22319
Sequence    

Annotation

kegg
ID tcc:TCM_019366
description Uncharacterized protein isoform 1
nr
ID KDP32986.1
description hypothetical protein JCGZ_13017 [Jatropha curcas]
swissprot
ID Q9C9N6
description Protein PLASTID MOVEMENT IMPAIRED 2 OS=Arabidopsis thaliana GN=PMI2 PE=1 SV=1
trembl
ID A0A067K9R5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_13017 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61158: 21533-21693
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008705_030 0.0 - - hypothetical protein JCGZ_13017 [Jatropha curcas]
2 Hb_174168_010 0.1181431828 - - hypothetical protein JCGZ_06105 [Jatropha curcas]
3 Hb_019570_010 0.1206207693 - - lyase, putative [Ricinus communis]
4 Hb_001348_040 0.1272206889 - - hypothetical protein VITISV_006651 [Vitis vinifera]
5 Hb_004218_140 0.1275421484 - - PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 isoform X3 [Jatropha curcas]
6 Hb_001369_460 0.1300336262 - - vacuolar invertase [Manihot esculenta]
7 Hb_004602_010 0.130638397 - - PREDICTED: uncharacterized protein LOC105042236 isoform X2 [Elaeis guineensis]
8 Hb_000283_030 0.1320365943 transcription factor TF Family: AUX/IAA PREDICTED: auxin-responsive protein IAA16-like [Populus euphratica]
9 Hb_001517_070 0.1320540828 - - protein with unknown function [Ricinus communis]
10 Hb_000947_010 0.1349988829 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA4 [Jatropha curcas]
11 Hb_002374_470 0.1373937777 - - PREDICTED: filament-like plant protein isoform X2 [Jatropha curcas]
12 Hb_103474_010 0.1384736264 - - serine/threonine protein kinase, putative [Ricinus communis]
13 Hb_007952_050 0.1385534989 - - PREDICTED: 125 kDa kinesin-related protein-like [Jatropha curcas]
14 Hb_001500_080 0.1389567882 - - PREDICTED: uncharacterized protein LOC105647337 isoform X1 [Jatropha curcas]
15 Hb_009693_010 0.1389886435 - - PREDICTED: proline-rich receptor-like protein kinase PERK15 [Gossypium raimondii]
16 Hb_062807_010 0.1441413676 - - hypothetical protein JCGZ_15896 [Jatropha curcas]
17 Hb_003043_130 0.1448276509 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor CRF2-like [Jatropha curcas]
18 Hb_000008_150 0.1470873466 - - PREDICTED: putative cyclic nucleotide-gated ion channel 15 [Jatropha curcas]
19 Hb_000732_220 0.1483396127 - - PREDICTED: importin subunit alpha-5 [Jatropha curcas]
20 Hb_004592_010 0.1483817233 transcription factor TF Family: bZIP PREDICTED: transcription factor RF2b-like [Jatropha curcas]

Gene co-expression network

sample Hb_008705_030 Hb_008705_030 Hb_174168_010 Hb_174168_010 Hb_008705_030--Hb_174168_010 Hb_019570_010 Hb_019570_010 Hb_008705_030--Hb_019570_010 Hb_001348_040 Hb_001348_040 Hb_008705_030--Hb_001348_040 Hb_004218_140 Hb_004218_140 Hb_008705_030--Hb_004218_140 Hb_001369_460 Hb_001369_460 Hb_008705_030--Hb_001369_460 Hb_004602_010 Hb_004602_010 Hb_008705_030--Hb_004602_010 Hb_174168_010--Hb_001369_460 Hb_007520_050 Hb_007520_050 Hb_174168_010--Hb_007520_050 Hb_000947_010 Hb_000947_010 Hb_174168_010--Hb_000947_010 Hb_003043_130 Hb_003043_130 Hb_174168_010--Hb_003043_130 Hb_002391_030 Hb_002391_030 Hb_174168_010--Hb_002391_030 Hb_040718_010 Hb_040718_010 Hb_174168_010--Hb_040718_010 Hb_000732_220 Hb_000732_220 Hb_019570_010--Hb_000732_220 Hb_004592_010 Hb_004592_010 Hb_019570_010--Hb_004592_010 Hb_001104_020 Hb_001104_020 Hb_019570_010--Hb_001104_020 Hb_002805_180 Hb_002805_180 Hb_019570_010--Hb_002805_180 Hb_000008_150 Hb_000008_150 Hb_019570_010--Hb_000008_150 Hb_005144_060 Hb_005144_060 Hb_019570_010--Hb_005144_060 Hb_004122_010 Hb_004122_010 Hb_001348_040--Hb_004122_010 Hb_062807_010 Hb_062807_010 Hb_001348_040--Hb_062807_010 Hb_002757_010 Hb_002757_010 Hb_001348_040--Hb_002757_010 Hb_005305_160 Hb_005305_160 Hb_001348_040--Hb_005305_160 Hb_000077_300 Hb_000077_300 Hb_001348_040--Hb_000077_300 Hb_000109_140 Hb_000109_140 Hb_001348_040--Hb_000109_140 Hb_004218_140--Hb_004602_010 Hb_001488_420 Hb_001488_420 Hb_004218_140--Hb_001488_420 Hb_121313_010 Hb_121313_010 Hb_004218_140--Hb_121313_010 Hb_005892_050 Hb_005892_050 Hb_004218_140--Hb_005892_050 Hb_008304_010 Hb_008304_010 Hb_004218_140--Hb_008304_010 Hb_000627_040 Hb_000627_040 Hb_004218_140--Hb_000627_040 Hb_001369_460--Hb_040718_010 Hb_001369_460--Hb_007520_050 Hb_001369_460--Hb_000947_010 Hb_006938_060 Hb_006938_060 Hb_001369_460--Hb_006938_060 Hb_001369_460--Hb_003043_130 Hb_000759_040 Hb_000759_040 Hb_004602_010--Hb_000759_040 Hb_004602_010--Hb_005892_050 Hb_004602_010--Hb_000008_150 Hb_004602_010--Hb_001488_420 Hb_004602_010--Hb_008304_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.018523 0.0719087 1.72075 0.687593 0.0173394 0.0176895
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.0314452 0.434443 0.911292

CAGE analysis