Hb_008725_080

Information

Type -
Description -
Location Contig8725: 40355-41446
Sequence    

Annotation

kegg
ID tcc:TCM_004746
description Galacturonosyltransferase-like 7 isoform 1
nr
ID XP_012082838.1
description PREDICTED: probable galacturonosyltransferase-like 7 [Jatropha curcas]
swissprot
ID Q8VYF4
description Probable galacturonosyltransferase-like 7 OS=Arabidopsis thaliana GN=GATL7 PE=2 SV=1
trembl
ID A0A067K8W1
description Hexosyltransferase OS=Jatropha curcas GN=JCGZ_13985 PE=3 SV=1
Gene Ontology
ID GO:0016757
description probable galacturonosyltransferase-like 7

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008725_080 0.0 - - PREDICTED: probable galacturonosyltransferase-like 7 [Jatropha curcas]
2 Hb_003408_010 0.1393273318 - - fructokinase [Manihot esculenta]
3 Hb_000328_010 0.1612796883 - - PREDICTED: QWRF motif-containing protein 8-like [Jatropha curcas]
4 Hb_105959_010 0.1629840625 - - asparagine synthetase, putative [Ricinus communis]
5 Hb_005144_120 0.1634969148 - - PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Jatropha curcas]
6 Hb_006153_160 0.1704675772 - - PREDICTED: oxysterol-binding protein-related protein 2A isoform X4 [Jatropha curcas]
7 Hb_000108_240 0.1782077724 - - hypothetical protein Csa_1G600150 [Cucumis sativus]
8 Hb_003894_030 0.1818916402 - - plant sec1, putative [Ricinus communis]
9 Hb_011004_050 0.1820995542 - - PREDICTED: kinesin-13A [Jatropha curcas]
10 Hb_000935_040 0.1833776184 - - Uncharacterized protein isoform 2 [Theobroma cacao]
11 Hb_003813_180 0.1842941197 - - sterol desaturase, putative [Ricinus communis]
12 Hb_005622_020 0.1855110144 - - PREDICTED: DCC family protein At1g52590, chloroplastic [Jatropha curcas]
13 Hb_000193_340 0.1857100097 - - PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Jatropha curcas]
14 Hb_001377_530 0.1865683968 - - NC domain-containing family protein [Populus trichocarpa]
15 Hb_002028_110 0.187038342 - - PREDICTED: F-box only protein 13 [Jatropha curcas]
16 Hb_000932_050 0.1876866794 - - annexin [Manihot esculenta]
17 Hb_048476_030 0.193970055 - - hypothetical protein POPTR_0010s11560g [Populus trichocarpa]
18 Hb_006889_020 0.1953470744 - - eukaryotic translation initiation factor 2c, putative [Ricinus communis]
19 Hb_000086_210 0.1959577124 - - ABC transporter family protein [Hevea brasiliensis]
20 Hb_033152_120 0.1970944929 - - PREDICTED: la-related protein 6C [Jatropha curcas]

Gene co-expression network

sample Hb_008725_080 Hb_008725_080 Hb_003408_010 Hb_003408_010 Hb_008725_080--Hb_003408_010 Hb_000328_010 Hb_000328_010 Hb_008725_080--Hb_000328_010 Hb_105959_010 Hb_105959_010 Hb_008725_080--Hb_105959_010 Hb_005144_120 Hb_005144_120 Hb_008725_080--Hb_005144_120 Hb_006153_160 Hb_006153_160 Hb_008725_080--Hb_006153_160 Hb_000108_240 Hb_000108_240 Hb_008725_080--Hb_000108_240 Hb_000932_050 Hb_000932_050 Hb_003408_010--Hb_000932_050 Hb_001450_040 Hb_001450_040 Hb_003408_010--Hb_001450_040 Hb_001401_040 Hb_001401_040 Hb_003408_010--Hb_001401_040 Hb_000023_110 Hb_000023_110 Hb_003408_010--Hb_000023_110 Hb_003408_010--Hb_000108_240 Hb_000328_010--Hb_006153_160 Hb_000193_340 Hb_000193_340 Hb_000328_010--Hb_000193_340 Hb_002498_030 Hb_002498_030 Hb_000328_010--Hb_002498_030 Hb_000086_210 Hb_000086_210 Hb_000328_010--Hb_000086_210 Hb_017439_010 Hb_017439_010 Hb_000328_010--Hb_017439_010 Hb_000328_010--Hb_005144_120 Hb_007925_010 Hb_007925_010 Hb_105959_010--Hb_007925_010 Hb_003813_180 Hb_003813_180 Hb_105959_010--Hb_003813_180 Hb_001289_020 Hb_001289_020 Hb_105959_010--Hb_001289_020 Hb_000742_160 Hb_000742_160 Hb_105959_010--Hb_000742_160 Hb_105959_010--Hb_003408_010 Hb_005144_120--Hb_000086_210 Hb_011004_050 Hb_011004_050 Hb_005144_120--Hb_011004_050 Hb_008179_030 Hb_008179_030 Hb_005144_120--Hb_008179_030 Hb_009222_110 Hb_009222_110 Hb_005144_120--Hb_009222_110 Hb_005563_010 Hb_005563_010 Hb_005144_120--Hb_005563_010 Hb_006153_160--Hb_000193_340 Hb_002759_220 Hb_002759_220 Hb_006153_160--Hb_002759_220 Hb_012395_110 Hb_012395_110 Hb_006153_160--Hb_012395_110 Hb_001433_150 Hb_001433_150 Hb_006153_160--Hb_001433_150 Hb_007101_260 Hb_007101_260 Hb_006153_160--Hb_007101_260 Hb_048476_140 Hb_048476_140 Hb_000108_240--Hb_048476_140 Hb_004041_050 Hb_004041_050 Hb_000108_240--Hb_004041_050 Hb_005622_020 Hb_005622_020 Hb_000108_240--Hb_005622_020 Hb_001180_010 Hb_001180_010 Hb_000108_240--Hb_001180_010 Hb_004650_030 Hb_004650_030 Hb_000108_240--Hb_004650_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
3.15572 2.45749 13.4266 16.031 0.172895 0.10883
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.40973 0.965576 5.2948 1.65057 7.21247

CAGE analysis