Hb_008727_130

Information

Type -
Description -
Location Contig8727: 72536-74011
Sequence    

Annotation

kegg
ID cam:101515184
description 18.5 kDa class I heat shock protein-like
nr
ID KCW52589.1
description hypothetical protein EUGRSUZ_J01958 [Eucalyptus grandis]
swissprot
ID -
description -
trembl
ID A0A059AFR7
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_J01958 PE=3 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008727_130 0.0 - - hypothetical protein EUGRSUZ_J01958 [Eucalyptus grandis]
2 Hb_012650_010 0.1962434021 - - hypothetical protein PRUPE_ppa022673mg [Prunus persica]
3 Hb_012253_020 0.2548317162 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
4 Hb_002123_030 0.264478794 - - hypothetical protein VITISV_003767 [Vitis vinifera]
5 Hb_153665_010 0.2811251291 - - PREDICTED: uncharacterized protein LOC104245945 [Nicotiana sylvestris]
6 Hb_030370_010 0.2854316061 - - PREDICTED: uncharacterized protein LOC104896222 [Beta vulgaris subsp. vulgaris]
7 Hb_000599_070 0.2918127839 - - PREDICTED: patellin-4-like [Jatropha curcas]
8 Hb_000089_050 0.2994201974 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
9 Hb_009042_010 0.3006210562 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
10 Hb_188450_010 0.3010472009 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_001799_220 0.30582882 transcription factor TF Family: AP2 Ethylene-responsive transcription factor, putative [Ricinus communis]
12 Hb_092855_030 0.3058651156 - - -
13 Hb_105581_010 0.3063187216 - - hypothetical protein, partial [Pseudomonas fluorescens]
14 Hb_075722_010 0.3090294569 - - hypothetical protein JCGZ_01984 [Jatropha curcas]
15 Hb_000101_280 0.3132007212 - - hypothetical protein POPTR_0018s02450g [Populus trichocarpa]
16 Hb_004041_010 0.3183258508 - - conserved hypothetical protein [Ricinus communis]
17 Hb_001965_020 0.3267990208 - - hypothetical protein B456_013G048700 [Gossypium raimondii]
18 Hb_163663_010 0.3275176555 - - PREDICTED: uncharacterized protein LOC105629934 [Jatropha curcas]
19 Hb_014988_030 0.3326549131 - - hypothetical protein VITISV_006810 [Vitis vinifera]
20 Hb_123951_010 0.3332100685 - - PREDICTED: uncharacterized protein LOC104894399 [Beta vulgaris subsp. vulgaris]

Gene co-expression network

sample Hb_008727_130 Hb_008727_130 Hb_012650_010 Hb_012650_010 Hb_008727_130--Hb_012650_010 Hb_012253_020 Hb_012253_020 Hb_008727_130--Hb_012253_020 Hb_002123_030 Hb_002123_030 Hb_008727_130--Hb_002123_030 Hb_153665_010 Hb_153665_010 Hb_008727_130--Hb_153665_010 Hb_030370_010 Hb_030370_010 Hb_008727_130--Hb_030370_010 Hb_000599_070 Hb_000599_070 Hb_008727_130--Hb_000599_070 Hb_002456_020 Hb_002456_020 Hb_012650_010--Hb_002456_020 Hb_020411_010 Hb_020411_010 Hb_012650_010--Hb_020411_010 Hb_016834_010 Hb_016834_010 Hb_012650_010--Hb_016834_010 Hb_012650_010--Hb_012253_020 Hb_000659_090 Hb_000659_090 Hb_012650_010--Hb_000659_090 Hb_012253_020--Hb_002123_030 Hb_012253_020--Hb_153665_010 Hb_012253_020--Hb_030370_010 Hb_012253_020--Hb_000599_070 Hb_009042_010 Hb_009042_010 Hb_012253_020--Hb_009042_010 Hb_188450_010 Hb_188450_010 Hb_012253_020--Hb_188450_010 Hb_002123_030--Hb_030370_010 Hb_001799_220 Hb_001799_220 Hb_002123_030--Hb_001799_220 Hb_002123_030--Hb_153665_010 Hb_002123_030--Hb_000599_070 Hb_002123_030--Hb_009042_010 Hb_153665_010--Hb_000599_070 Hb_153665_010--Hb_009042_010 Hb_153665_010--Hb_188450_010 Hb_123951_010 Hb_123951_010 Hb_153665_010--Hb_123951_010 Hb_153665_010--Hb_030370_010 Hb_030370_010--Hb_001799_220 Hb_030370_010--Hb_000599_070 Hb_030370_010--Hb_009042_010 Hb_030370_010--Hb_188450_010 Hb_000599_070--Hb_009042_010 Hb_000599_070--Hb_188450_010 Hb_000599_070--Hb_123951_010 Hb_004762_020 Hb_004762_020 Hb_000599_070--Hb_004762_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0518266 0 0 0 0 0.105777
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0755141 0.189522

CAGE analysis