Hb_008731_010

Information

Type -
Description -
Location Contig8731: 37430-38102
Sequence    

Annotation

kegg
ID pop:POPTR_0605s00010g
description hypothetical protein
nr
ID XP_006387760.1
description hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
swissprot
ID -
description -
trembl
ID U7DWS5
description Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0605s00010g PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008731_010 0.0 - - hypothetical protein POPTR_0605s00010g [Populus trichocarpa]
2 Hb_000344_030 0.0535266741 - - phenylalanine ammonia-lyase 1 [Manihot esculenta]
3 Hb_002007_330 0.0603124907 - - PREDICTED: putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 [Jatropha curcas]
4 Hb_007403_100 0.072289679 - - PREDICTED: probable purple acid phosphatase 20 [Jatropha curcas]
5 Hb_002384_030 0.0734281358 - - conserved hypothetical protein [Ricinus communis]
6 Hb_002000_100 0.0753264797 - - PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Jatropha curcas]
7 Hb_001257_140 0.0899384157 - - Gb:AAF02129.1, putative [Theobroma cacao]
8 Hb_001360_020 0.0951623558 - - PREDICTED: S-adenosylmethionine synthase 1 [Nelumbo nucifera]
9 Hb_142056_010 0.1025615978 - - PREDICTED: MATE efflux family protein 1 isoform X2 [Jatropha curcas]
10 Hb_008021_050 0.1026272162 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_010863_020 0.1041709074 - - PREDICTED: BTB/POZ domain-containing protein At1g03010-like isoform X1 [Jatropha curcas]
12 Hb_000477_020 0.1054178083 - - hypothetical protein EUGRSUZ_C011052, partial [Eucalyptus grandis]
13 Hb_003849_170 0.1073899417 - - hypothetical protein JCGZ_17850 [Jatropha curcas]
14 Hb_000659_050 0.1084151057 - - PREDICTED: basic blue protein-like [Jatropha curcas]
15 Hb_003607_080 0.1101443755 - - PREDICTED: putative kinase-like protein TMKL1 [Jatropha curcas]
16 Hb_027405_010 0.1116356084 - - PREDICTED: uncharacterized protein At3g17950-like [Populus euphratica]
17 Hb_000352_360 0.1119017659 - - PREDICTED: 4-coumarate--CoA ligase 1-like [Jatropha curcas]
18 Hb_002869_090 0.1124527332 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
19 Hb_001454_350 0.1154384357 - - PREDICTED: uncharacterized protein LOC105643449 [Jatropha curcas]
20 Hb_170077_020 0.1156466403 - - PREDICTED: probable serine incorporator [Jatropha curcas]

Gene co-expression network

sample Hb_008731_010 Hb_008731_010 Hb_000344_030 Hb_000344_030 Hb_008731_010--Hb_000344_030 Hb_002007_330 Hb_002007_330 Hb_008731_010--Hb_002007_330 Hb_007403_100 Hb_007403_100 Hb_008731_010--Hb_007403_100 Hb_002384_030 Hb_002384_030 Hb_008731_010--Hb_002384_030 Hb_002000_100 Hb_002000_100 Hb_008731_010--Hb_002000_100 Hb_001257_140 Hb_001257_140 Hb_008731_010--Hb_001257_140 Hb_000344_030--Hb_002007_330 Hb_000659_050 Hb_000659_050 Hb_000344_030--Hb_000659_050 Hb_000910_030 Hb_000910_030 Hb_000344_030--Hb_000910_030 Hb_002869_090 Hb_002869_090 Hb_000344_030--Hb_002869_090 Hb_000344_030--Hb_007403_100 Hb_002007_330--Hb_007403_100 Hb_002007_330--Hb_002000_100 Hb_000477_020 Hb_000477_020 Hb_002007_330--Hb_000477_020 Hb_142056_010 Hb_142056_010 Hb_002007_330--Hb_142056_010 Hb_007403_100--Hb_002000_100 Hb_007403_100--Hb_000477_020 Hb_000897_010 Hb_000897_010 Hb_007403_100--Hb_000897_010 Hb_001360_020 Hb_001360_020 Hb_002384_030--Hb_001360_020 Hb_027405_010 Hb_027405_010 Hb_002384_030--Hb_027405_010 Hb_022693_090 Hb_022693_090 Hb_002384_030--Hb_022693_090 Hb_002384_030--Hb_002000_100 Hb_002384_030--Hb_000344_030 Hb_002000_100--Hb_142056_010 Hb_002000_100--Hb_001360_020 Hb_005144_150 Hb_005144_150 Hb_001257_140--Hb_005144_150 Hb_003849_170 Hb_003849_170 Hb_001257_140--Hb_003849_170 Hb_000352_360 Hb_000352_360 Hb_001257_140--Hb_000352_360 Hb_010863_020 Hb_010863_020 Hb_001257_140--Hb_010863_020 Hb_170077_020 Hb_170077_020 Hb_001257_140--Hb_170077_020 Hb_003858_070 Hb_003858_070 Hb_001257_140--Hb_003858_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.146054 0.135851 1.33536 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.132734 0.272949

CAGE analysis