Hb_008762_010

Information

Type -
Description -
Location Contig8762: 11012-12211
Sequence    

Annotation

kegg
ID rcu:RCOM_0495460
description dopamine beta-monooxygenase, putative
nr
ID XP_002532009.1
description dopamine beta-monooxygenase, putative [Ricinus communis]
swissprot
ID Q9SJ74
description Cytochrome b561 and DOMON domain-containing protein At2g04850 OS=Arabidopsis thaliana GN=At2g04850 PE=2 SV=2
trembl
ID B9T190
description Dopamine beta-monooxygenase, putative OS=Ricinus communis GN=RCOM_0495460 PE=4 SV=1
Gene Ontology
ID GO:0016021
description auxin-responsive family protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008762_010 0.0 - - dopamine beta-monooxygenase, putative [Ricinus communis]
2 Hb_031284_060 0.1016459334 - - PREDICTED: cellulose synthase A catalytic subunit 7 [UDP-forming] [Jatropha curcas]
3 Hb_000130_350 0.1044484403 - - PREDICTED: protein IQ-DOMAIN 1-like [Jatropha curcas]
4 Hb_116701_010 0.1096698272 - - hypothetical protein POPTR_0005s19410g [Populus trichocarpa]
5 Hb_001189_080 0.1179266024 - - conserved hypothetical protein [Ricinus communis]
6 Hb_158092_050 0.1234791104 - - PREDICTED: probable beta-1,4-xylosyltransferase IRX10 [Jatropha curcas]
7 Hb_005523_030 0.1240389895 - - PREDICTED: probable galacturonosyltransferase 12 [Jatropha curcas]
8 Hb_000193_320 0.1276677999 - - conserved hypothetical protein [Ricinus communis]
9 Hb_015807_090 0.1282963578 - - PREDICTED: probable galacturonosyltransferase 12 [Jatropha curcas]
10 Hb_000173_240 0.1283528759 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000086_490 0.1285723111 - - cellulose synthase [Populus tomentosa]
12 Hb_000428_040 0.1289722634 - - PREDICTED: protein trichome birefringence-like 31 [Populus euphratica]
13 Hb_005686_040 0.1291998158 - - conserved hypothetical protein [Ricinus communis]
14 Hb_005183_130 0.1294726438 - - glycogenin, putative [Ricinus communis]
15 Hb_002078_180 0.1294972255 - - PREDICTED: 65-kDa microtubule-associated protein 8 [Jatropha curcas]
16 Hb_001377_230 0.1311526369 - - PREDICTED: uncharacterized protein LOC105135159 [Populus euphratica]
17 Hb_001051_060 0.1314566346 - - UDP-glucuronic acid/UDP-N-acetylgalactosamine transporter, putative [Ricinus communis]
18 Hb_012633_020 0.1315845635 - - laccase, putative [Ricinus communis]
19 Hb_006065_030 0.1324308036 - - PREDICTED: filament-like plant protein 7 isoform X1 [Jatropha curcas]
20 Hb_008461_060 0.1329385207 - - hypothetical protein JCGZ_17379 [Jatropha curcas]

Gene co-expression network

sample Hb_008762_010 Hb_008762_010 Hb_031284_060 Hb_031284_060 Hb_008762_010--Hb_031284_060 Hb_000130_350 Hb_000130_350 Hb_008762_010--Hb_000130_350 Hb_116701_010 Hb_116701_010 Hb_008762_010--Hb_116701_010 Hb_001189_080 Hb_001189_080 Hb_008762_010--Hb_001189_080 Hb_158092_050 Hb_158092_050 Hb_008762_010--Hb_158092_050 Hb_005523_030 Hb_005523_030 Hb_008762_010--Hb_005523_030 Hb_000193_320 Hb_000193_320 Hb_031284_060--Hb_000193_320 Hb_000328_030 Hb_000328_030 Hb_031284_060--Hb_000328_030 Hb_001712_030 Hb_001712_030 Hb_031284_060--Hb_001712_030 Hb_031284_060--Hb_005523_030 Hb_002078_180 Hb_002078_180 Hb_031284_060--Hb_002078_180 Hb_000086_490 Hb_000086_490 Hb_031284_060--Hb_000086_490 Hb_000130_350--Hb_116701_010 Hb_000130_350--Hb_158092_050 Hb_000130_350--Hb_031284_060 Hb_000173_240 Hb_000173_240 Hb_000130_350--Hb_000173_240 Hb_000428_040 Hb_000428_040 Hb_000130_350--Hb_000428_040 Hb_116701_010--Hb_158092_050 Hb_116701_010--Hb_000428_040 Hb_116701_010--Hb_000173_240 Hb_001366_110 Hb_001366_110 Hb_116701_010--Hb_001366_110 Hb_001051_060 Hb_001051_060 Hb_001189_080--Hb_001051_060 Hb_005686_040 Hb_005686_040 Hb_001189_080--Hb_005686_040 Hb_001189_080--Hb_000086_490 Hb_012633_020 Hb_012633_020 Hb_001189_080--Hb_012633_020 Hb_001189_080--Hb_005523_030 Hb_050514_030 Hb_050514_030 Hb_001189_080--Hb_050514_030 Hb_158092_050--Hb_000173_240 Hb_008461_060 Hb_008461_060 Hb_158092_050--Hb_008461_060 Hb_158092_050--Hb_031284_060 Hb_158092_050--Hb_000193_320 Hb_005523_030--Hb_000086_490 Hb_015807_090 Hb_015807_090 Hb_005523_030--Hb_015807_090 Hb_005523_030--Hb_001051_060 Hb_005523_030--Hb_005686_040 Hb_000776_090 Hb_000776_090 Hb_005523_030--Hb_000776_090 Hb_005523_030--Hb_002078_180
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.390081 3.14736 2.55038 57.1311 1.64632 0.512668
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.851979 0.414874 0.0593675 0.15341 33.7497

CAGE analysis