Hb_008779_010

Information

Type -
Description -
Location Contig8779: 611-1273
Sequence    

Annotation

kegg
ID pop:POPTR_0011s036301
description hypothetical protein
nr
ID XP_012084625.1
description PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
swissprot
ID O81906
description G-type lectin S-receptor-like serine/threonine-protein kinase B120 OS=Arabidopsis thaliana GN=B120 PE=2 SV=1
trembl
ID A0A067K6D5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_20198 PE=4 SV=1
Gene Ontology
ID GO:0004674
description g-type lectin s-receptor-like serine threonine-protein kinase rks1 isoform x4

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008779_010 0.0 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RKS1 [Jatropha curcas]
2 Hb_008643_010 0.0118884423 - - hypothetical protein JCGZ_04298 [Jatropha curcas]
3 Hb_001638_220 0.172361936 - - conserved hypothetical protein [Ricinus communis]
4 Hb_054362_010 0.2095581311 - - PREDICTED: uncharacterized protein LOC105650428 [Jatropha curcas]
5 Hb_006683_010 0.2241286845 - - cell wall invertase [Manihot esculenta]
6 Hb_000455_100 0.2305191896 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
7 Hb_127993_010 0.2317893877 - - PREDICTED: choline monooxygenase, chloroplastic isoform X4 [Jatropha curcas]
8 Hb_001956_030 0.2510712057 - - PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Populus euphratica]
9 Hb_000050_130 0.2599326466 - - Putative Pol polyprotein from transposon element Bs1 [Triticum urartu]
10 Hb_001726_030 0.260154922 - - Ferulic acid 5-hydroxylase 1 [Theobroma cacao]
11 Hb_169574_010 0.2778917347 - - PREDICTED: uncharacterized protein LOC104120373 [Nicotiana tomentosiformis]
12 Hb_048874_010 0.2803690618 - - hypothetical protein POPTR_0016s10870g [Populus trichocarpa]
13 Hb_005218_040 0.2851975396 - - PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 8-like [Jatropha curcas]
14 Hb_005799_040 0.2864731037 - - PREDICTED: bidirectional sugar transporter SWEET4-like isoform X1 [Gossypium raimondii]
15 Hb_008246_050 0.2865179797 - - -
16 Hb_002675_120 0.2931617785 - - DNA-repair protein xrcc1, putative [Ricinus communis]
17 Hb_155384_010 0.2968582068 - - -
18 Hb_020580_010 0.3088897997 - - -
19 Hb_003835_050 0.3131718561 - - Anthocyanidin 3-O-glucosyltransferase [Medicago truncatula]
20 Hb_000926_130 0.3165523127 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]

Gene co-expression network

sample Hb_008779_010 Hb_008779_010 Hb_008643_010 Hb_008643_010 Hb_008779_010--Hb_008643_010 Hb_001638_220 Hb_001638_220 Hb_008779_010--Hb_001638_220 Hb_054362_010 Hb_054362_010 Hb_008779_010--Hb_054362_010 Hb_006683_010 Hb_006683_010 Hb_008779_010--Hb_006683_010 Hb_000455_100 Hb_000455_100 Hb_008779_010--Hb_000455_100 Hb_127993_010 Hb_127993_010 Hb_008779_010--Hb_127993_010 Hb_008643_010--Hb_001638_220 Hb_008643_010--Hb_054362_010 Hb_008643_010--Hb_006683_010 Hb_008643_010--Hb_000455_100 Hb_008643_010--Hb_127993_010 Hb_020580_010 Hb_020580_010 Hb_001638_220--Hb_020580_010 Hb_013429_020 Hb_013429_020 Hb_001638_220--Hb_013429_020 Hb_001638_220--Hb_054362_010 Hb_001638_220--Hb_006683_010 Hb_054362_010--Hb_127993_010 Hb_169574_010 Hb_169574_010 Hb_054362_010--Hb_169574_010 Hb_048874_010 Hb_048874_010 Hb_054362_010--Hb_048874_010 Hb_005799_040 Hb_005799_040 Hb_054362_010--Hb_005799_040 Hb_008246_050 Hb_008246_050 Hb_054362_010--Hb_008246_050 Hb_162126_010 Hb_162126_010 Hb_054362_010--Hb_162126_010 Hb_002675_120 Hb_002675_120 Hb_006683_010--Hb_002675_120 Hb_000050_130 Hb_000050_130 Hb_006683_010--Hb_000050_130 Hb_001652_110 Hb_001652_110 Hb_006683_010--Hb_001652_110 Hb_000160_100 Hb_000160_100 Hb_006683_010--Hb_000160_100 Hb_000926_130 Hb_000926_130 Hb_000455_100--Hb_000926_130 Hb_000056_330 Hb_000056_330 Hb_000455_100--Hb_000056_330 Hb_002849_150 Hb_002849_150 Hb_000455_100--Hb_002849_150 Hb_000455_100--Hb_006683_010 Hb_127993_010--Hb_169574_010 Hb_127993_010--Hb_048874_010 Hb_127993_010--Hb_005799_040 Hb_127993_010--Hb_008246_050 Hb_127993_010--Hb_162126_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0.525418 1.46715 0

CAGE analysis