Hb_008783_010

Information

Type -
Description -
Location Contig8783: 1222-1707
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008783_010 0.0 - - -
2 Hb_000505_120 0.1042571253 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
3 Hb_015076_020 0.1546313297 - - IMP dehydrogenase/GMP reductase [Hevea brasiliensis]
4 Hb_011280_020 0.1591431908 - - polyprotein [Oryza australiensis]
5 Hb_097006_010 0.1802899293 - - PREDICTED: uncharacterized protein LOC105632410 [Jatropha curcas]
6 Hb_010164_040 0.2231938616 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
7 Hb_004241_030 0.2347795089 - - conserved hypothetical protein [Ricinus communis]
8 Hb_003413_010 0.242870036 - - hypothetical protein, partial [Pseudomonas fluorescens]
9 Hb_000089_050 0.2443742124 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
10 Hb_004687_010 0.2665450948 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
11 Hb_015778_020 0.2688892497 - - Putative methyltransferase family protein [Solanum demissum]
12 Hb_003417_070 0.2723106484 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
13 Hb_010452_010 0.2769157187 - - PREDICTED: uncharacterized protein LOC104232369 [Nicotiana sylvestris]
14 Hb_000136_080 0.2896964893 - - hypothetical protein AALP_AA8G499800 [Arabis alpina]
15 Hb_070905_010 0.2929843436 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
16 Hb_001241_050 0.2948778359 - - PREDICTED: uncharacterized protein LOC104880586 isoform X1 [Vitis vinifera]
17 Hb_000574_140 0.2986691953 - - -
18 Hb_000975_260 0.3065387864 - - conserved hypothetical protein [Ricinus communis]
19 Hb_146617_010 0.3109996957 - - PREDICTED: uncharacterized protein LOC105796032 [Gossypium raimondii]
20 Hb_009152_030 0.3131601573 - - hypothetical protein L484_026849 [Morus notabilis]

Gene co-expression network

sample Hb_008783_010 Hb_008783_010 Hb_000505_120 Hb_000505_120 Hb_008783_010--Hb_000505_120 Hb_015076_020 Hb_015076_020 Hb_008783_010--Hb_015076_020 Hb_011280_020 Hb_011280_020 Hb_008783_010--Hb_011280_020 Hb_097006_010 Hb_097006_010 Hb_008783_010--Hb_097006_010 Hb_010164_040 Hb_010164_040 Hb_008783_010--Hb_010164_040 Hb_004241_030 Hb_004241_030 Hb_008783_010--Hb_004241_030 Hb_000505_120--Hb_011280_020 Hb_000505_120--Hb_015076_020 Hb_003413_010 Hb_003413_010 Hb_000505_120--Hb_003413_010 Hb_000505_120--Hb_004241_030 Hb_000505_120--Hb_097006_010 Hb_010452_010 Hb_010452_010 Hb_015076_020--Hb_010452_010 Hb_015076_020--Hb_011280_020 Hb_015778_020 Hb_015778_020 Hb_015076_020--Hb_015778_020 Hb_015076_020--Hb_004241_030 Hb_011280_020--Hb_003413_010 Hb_083663_010 Hb_083663_010 Hb_011280_020--Hb_083663_010 Hb_011280_020--Hb_004241_030 Hb_097006_010--Hb_010164_040 Hb_128193_010 Hb_128193_010 Hb_097006_010--Hb_128193_010 Hb_001241_050 Hb_001241_050 Hb_097006_010--Hb_001241_050 Hb_001629_040 Hb_001629_040 Hb_097006_010--Hb_001629_040 Hb_010164_040--Hb_128193_010 Hb_010164_040--Hb_001241_050 Hb_129046_010 Hb_129046_010 Hb_010164_040--Hb_129046_010 Hb_010164_040--Hb_001629_040 Hb_000574_140 Hb_000574_140 Hb_004241_030--Hb_000574_140 Hb_004687_010 Hb_004687_010 Hb_004241_030--Hb_004687_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.187403 0.155283 0 0 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.119074 0.412065

CAGE analysis