Hb_008783_020

Information

Type -
Description -
Location Contig8783: 14852-16124
Sequence    

Annotation

kegg
ID pop:POPTR_0017s09240g
description hypothetical protein
nr
ID KDP20813.1
description hypothetical protein JCGZ_21284 [Jatropha curcas]
swissprot
ID Q9LRJ9
description Cysteine-rich repeat secretory protein 38 OS=Arabidopsis thaliana GN=CRRSP38 PE=2 SV=1
trembl
ID A0A067JDJ2
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21284 PE=4 SV=1
Gene Ontology
ID GO:0016301
description cysteine-rich repeat secretory protein 38-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61322: 15266-16114
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008783_020 0.0 - - hypothetical protein JCGZ_21284 [Jatropha curcas]
2 Hb_000403_110 0.0705658988 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 51 [Jatropha curcas]
3 Hb_107809_010 0.0849118877 - - JHL06P13.14 [Jatropha curcas]
4 Hb_005276_220 0.0884718983 transcription factor TF Family: bHLH PREDICTED: basic helix-loop-helix protein A [Jatropha curcas]
5 Hb_001102_270 0.0887525935 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
6 Hb_001421_010 0.0910394553 transcription factor TF Family: ARR-B PREDICTED: two-component response regulator-like APRR2 isoform X1 [Jatropha curcas]
7 Hb_175758_010 0.0922212083 - - PREDICTED: aspartic proteinase A1-like isoform X2 [Jatropha curcas]
8 Hb_001318_120 0.1016270923 - - PREDICTED: uncharacterized protein LOC105642675 [Jatropha curcas]
9 Hb_010519_020 0.1053645296 - - hypothetical protein JCGZ_19028 [Jatropha curcas]
10 Hb_005542_040 0.1054063797 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 55 [Jatropha curcas]
11 Hb_000163_250 0.1057217881 - - unnamed protein product [Vitis vinifera]
12 Hb_000359_280 0.1057640617 - - hypothetical protein OsI_15300 [Oryza sativa Indica Group]
13 Hb_011472_020 0.1098634743 - - PREDICTED: mucin-17-like [Jatropha curcas]
14 Hb_000011_120 0.1159106525 - - PREDICTED: ATPase 10, plasma membrane-type-like [Populus euphratica]
15 Hb_038670_010 0.1214444029 - - Major allergen Pru ar, putative [Ricinus communis]
16 Hb_009659_040 0.1222760098 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein NUTCRACKER [Populus euphratica]
17 Hb_007919_030 0.1232358961 - - -
18 Hb_004884_200 0.124690442 - - PREDICTED: ferritin-3, chloroplastic [Jatropha curcas]
19 Hb_001894_040 0.127603914 - - PREDICTED: carbonic anhydrase 2 isoform X1 [Jatropha curcas]
20 Hb_000085_230 0.1300098681 - - PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Jatropha curcas]

Gene co-expression network

sample Hb_008783_020 Hb_008783_020 Hb_000403_110 Hb_000403_110 Hb_008783_020--Hb_000403_110 Hb_107809_010 Hb_107809_010 Hb_008783_020--Hb_107809_010 Hb_005276_220 Hb_005276_220 Hb_008783_020--Hb_005276_220 Hb_001102_270 Hb_001102_270 Hb_008783_020--Hb_001102_270 Hb_001421_010 Hb_001421_010 Hb_008783_020--Hb_001421_010 Hb_175758_010 Hb_175758_010 Hb_008783_020--Hb_175758_010 Hb_000403_110--Hb_001421_010 Hb_000403_110--Hb_005276_220 Hb_010519_020 Hb_010519_020 Hb_000403_110--Hb_010519_020 Hb_000403_110--Hb_175758_010 Hb_001318_120 Hb_001318_120 Hb_000403_110--Hb_001318_120 Hb_005542_040 Hb_005542_040 Hb_107809_010--Hb_005542_040 Hb_001634_080 Hb_001634_080 Hb_107809_010--Hb_001634_080 Hb_000108_090 Hb_000108_090 Hb_107809_010--Hb_000108_090 Hb_107809_010--Hb_005276_220 Hb_000521_360 Hb_000521_360 Hb_107809_010--Hb_000521_360 Hb_011472_020 Hb_011472_020 Hb_005276_220--Hb_011472_020 Hb_005276_220--Hb_001318_120 Hb_005276_220--Hb_005542_040 Hb_005276_220--Hb_175758_010 Hb_005276_220--Hb_010519_020 Hb_000359_280 Hb_000359_280 Hb_001102_270--Hb_000359_280 Hb_001355_110 Hb_001355_110 Hb_001102_270--Hb_001355_110 Hb_187991_010 Hb_187991_010 Hb_001102_270--Hb_187991_010 Hb_063523_010 Hb_063523_010 Hb_001102_270--Hb_063523_010 Hb_007765_140 Hb_007765_140 Hb_001102_270--Hb_007765_140 Hb_001421_010--Hb_175758_010 Hb_001421_010--Hb_010519_020 Hb_001421_010--Hb_011472_020 Hb_001329_110 Hb_001329_110 Hb_001421_010--Hb_001329_110 Hb_175758_010--Hb_001329_110 Hb_175758_010--Hb_010519_020 Hb_000011_120 Hb_000011_120 Hb_175758_010--Hb_000011_120 Hb_175758_010--Hb_001318_120 Hb_000840_050 Hb_000840_050 Hb_175758_010--Hb_000840_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.13868 2.53669 1.90099 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0450637 0 0 7.4958 2.4083

CAGE analysis