Hb_008864_090

Information

Type -
Description -
Location Contig8864: 69517-78280
Sequence    

Annotation

kegg
ID rcu:RCOM_0938370
description non-symbiotic hemoglobin, putative
nr
ID XP_012069402.1
description PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
swissprot
ID Q9FVL0
description Non-symbiotic hemoglobin 1 OS=Medicago sativa GN=MHB1 PE=2 SV=1
trembl
ID B9RZD8
description Non-symbiotic hemoglobin, putative OS=Ricinus communis GN=RCOM_0938370 PE=3 SV=1
Gene Ontology
ID GO:0005506
description non-symbiotic hemoglobin

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61507: 70246-71399 , PASA_asmbl_61508: 74682-78252 , PASA_asmbl_61509: 72363-74276 , PASA_asmbl_61510: 74144-74301 , PASA_asmbl_61511: 72444-78203
cDNA
(Sanger)
(ID:Location)		 007_O15.ab1: 70246-71399

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008864_090 0.0 - - PREDICTED: plastid division protein PDV2-like [Jatropha curcas]
2 Hb_119494_010 0.1136661576 - - PREDICTED: box C/D snoRNA protein 1 [Jatropha curcas]
3 Hb_001427_070 0.1210462342 - - PREDICTED: xaa-Pro dipeptidase [Jatropha curcas]
4 Hb_010029_020 0.1229629274 - - PREDICTED: serine/threonine-protein kinase CTR1 [Jatropha curcas]
5 Hb_077562_030 0.1278544599 - - PREDICTED: cytochrome P450 4X1-like isoform X1 [Jatropha curcas]
6 Hb_008147_070 0.1286788459 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
7 Hb_014894_010 0.1326456444 - - hypothetical protein CICLE_v10001869mg [Citrus clementina]
8 Hb_006111_080 0.1349752943 - - hypothetical protein JCGZ_18070 [Jatropha curcas]
9 Hb_002972_020 0.135371112 - - PREDICTED: probable ubiquitin-like-specific protease 2A isoform X1 [Jatropha curcas]
10 Hb_002005_100 0.1356841024 - - -
11 Hb_001232_010 0.1391469552 - - PREDICTED: uncharacterized protein LOC105634976 [Jatropha curcas]
12 Hb_000140_480 0.1414300918 - - PREDICTED: uncharacterized protein LOC105637350 [Jatropha curcas]
13 Hb_000152_660 0.1429865955 - - PREDICTED: BAG family molecular chaperone regulator 7 [Jatropha curcas]
14 Hb_004586_350 0.1443425584 - - Phosphoribosylaminoimidazole-succinocarboxamide synthase [Morus notabilis]
15 Hb_001021_080 0.1471034062 - - PREDICTED: autophagy-related protein 18a [Jatropha curcas]
16 Hb_002391_210 0.1484748877 - - PREDICTED: putative F-box protein At1g65770 [Jatropha curcas]
17 Hb_002477_090 0.1498358044 - - PREDICTED: uncharacterized protein LOC105631409 isoform X1 [Jatropha curcas]
18 Hb_002471_290 0.15168352 - - PREDICTED: vacuolar fusion protein CCZ1 homolog isoform X1 [Jatropha curcas]
19 Hb_015175_050 0.1517514373 - - PREDICTED: AT-hook motif nuclear-localized protein 10 isoform X3 [Jatropha curcas]
20 Hb_002027_140 0.152441372 - - PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.6 [Jatropha curcas]

Gene co-expression network

sample Hb_008864_090 Hb_008864_090 Hb_119494_010 Hb_119494_010 Hb_008864_090--Hb_119494_010 Hb_001427_070 Hb_001427_070 Hb_008864_090--Hb_001427_070 Hb_010029_020 Hb_010029_020 Hb_008864_090--Hb_010029_020 Hb_077562_030 Hb_077562_030 Hb_008864_090--Hb_077562_030 Hb_008147_070 Hb_008147_070 Hb_008864_090--Hb_008147_070 Hb_014894_010 Hb_014894_010 Hb_008864_090--Hb_014894_010 Hb_003253_050 Hb_003253_050 Hb_119494_010--Hb_003253_050 Hb_002005_100 Hb_002005_100 Hb_119494_010--Hb_002005_100 Hb_002400_410 Hb_002400_410 Hb_119494_010--Hb_002400_410 Hb_119494_010--Hb_008147_070 Hb_119494_010--Hb_014894_010 Hb_001214_090 Hb_001214_090 Hb_119494_010--Hb_001214_090 Hb_000140_480 Hb_000140_480 Hb_001427_070--Hb_000140_480 Hb_001761_130 Hb_001761_130 Hb_001427_070--Hb_001761_130 Hb_000152_660 Hb_000152_660 Hb_001427_070--Hb_000152_660 Hb_006831_040 Hb_006831_040 Hb_001427_070--Hb_006831_040 Hb_002391_210 Hb_002391_210 Hb_001427_070--Hb_002391_210 Hb_002110_030 Hb_002110_030 Hb_001427_070--Hb_002110_030 Hb_010029_020--Hb_001427_070 Hb_134469_010 Hb_134469_010 Hb_010029_020--Hb_134469_010 Hb_001004_110 Hb_001004_110 Hb_010029_020--Hb_001004_110 Hb_007904_130 Hb_007904_130 Hb_010029_020--Hb_007904_130 Hb_010021_010 Hb_010021_010 Hb_010029_020--Hb_010021_010 Hb_077562_030--Hb_008147_070 Hb_172632_110 Hb_172632_110 Hb_077562_030--Hb_172632_110 Hb_077562_030--Hb_001761_130 Hb_002477_090 Hb_002477_090 Hb_077562_030--Hb_002477_090 Hb_001232_010 Hb_001232_010 Hb_077562_030--Hb_001232_010 Hb_000684_290 Hb_000684_290 Hb_077562_030--Hb_000684_290 Hb_001021_080 Hb_001021_080 Hb_008147_070--Hb_001021_080 Hb_109002_020 Hb_109002_020 Hb_008147_070--Hb_109002_020 Hb_008147_070--Hb_002400_410 Hb_008147_070--Hb_172632_110 Hb_001246_030 Hb_001246_030 Hb_014894_010--Hb_001246_030 Hb_014894_010--Hb_002005_100 Hb_001258_060 Hb_001258_060 Hb_014894_010--Hb_001258_060 Hb_004079_080 Hb_004079_080 Hb_014894_010--Hb_004079_080
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.13247 11.1939 5.42882 3.94697 6.45001 9.34265
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
8.99128 8.00508 9.81775 31.3093 5.11359

CAGE analysis