Hb_008931_020

Information

Type -
Description -
Location Contig8931: 21624-24371
Sequence    

Annotation

kegg
ID tcc:TCM_026464
description Receptor like protein 46, putative
nr
ID XP_007030719.1
description Receptor like protein 46, putative [Theobroma cacao]
swissprot
ID C0LGS2
description Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=2 SV=1
trembl
ID A0A061F2G1
description Receptor like protein 46, putative OS=Theobroma cacao GN=TCM_026464 PE=4 SV=1
Gene Ontology
ID GO:0007165
description lrr receptor-like serine threonine-protein kinase gso1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008931_020 0.0 - - Receptor like protein 46, putative [Theobroma cacao]
2 Hb_011671_290 0.0989087978 transcription factor TF Family: ERF hypothetical protein JCGZ_26299 [Jatropha curcas]
3 Hb_000563_380 0.1002378189 - - hypothetical protein CICLE_v10007206mg [Citrus clementina]
4 Hb_000635_170 0.1002589121 - - cytochrome P450, putative [Ricinus communis]
5 Hb_000959_290 0.1174997112 - - PREDICTED: uncharacterized protein LOC105636589 [Jatropha curcas]
6 Hb_000045_110 0.1181800689 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Jatropha curcas]
7 Hb_002572_060 0.1200156918 - - conserved hypothetical protein [Ricinus communis]
8 Hb_001031_020 0.1243792582 - - hypothetical protein VITISV_000631 [Vitis vinifera]
9 Hb_000414_100 0.1296358428 - - PREDICTED: uncharacterized protein LOC105643784 [Jatropha curcas]
10 Hb_000610_030 0.1312312067 - - hypothetical protein MIMGU_mgv1a0038491mg, partial [Erythranthe guttata]
11 Hb_004767_040 0.1319718591 - - Lysosomal Pro-X carboxypeptidase, putative [Ricinus communis]
12 Hb_033153_010 0.1342098126 - - PREDICTED: MLO-like protein 12 [Jatropha curcas]
13 Hb_011805_060 0.134378018 - - PREDICTED: receptor-like protein 12 [Jatropha curcas]
14 Hb_004994_070 0.1357777446 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
15 Hb_006519_010 0.1365900933 desease resistance Gene Name: NB-ARC PREDICTED: probable disease resistance protein At4g27220 [Vitis vinifera]
16 Hb_001190_020 0.1369099008 - - ankyrin repeat-containing protein, putative [Ricinus communis]
17 Hb_000261_540 0.140108696 - - PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Jatropha curcas]
18 Hb_093204_010 0.1440818968 - - conserved hypothetical protein [Ricinus communis]
19 Hb_000336_170 0.144617615 - - Polcalcin Jun o, putative [Ricinus communis]
20 Hb_005588_150 0.1492860448 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_008931_020 Hb_008931_020 Hb_011671_290 Hb_011671_290 Hb_008931_020--Hb_011671_290 Hb_000563_380 Hb_000563_380 Hb_008931_020--Hb_000563_380 Hb_000635_170 Hb_000635_170 Hb_008931_020--Hb_000635_170 Hb_000959_290 Hb_000959_290 Hb_008931_020--Hb_000959_290 Hb_000045_110 Hb_000045_110 Hb_008931_020--Hb_000045_110 Hb_002572_060 Hb_002572_060 Hb_008931_020--Hb_002572_060 Hb_000610_030 Hb_000610_030 Hb_011671_290--Hb_000610_030 Hb_011671_290--Hb_002572_060 Hb_011671_290--Hb_000959_290 Hb_000414_100 Hb_000414_100 Hb_011671_290--Hb_000414_100 Hb_004994_070 Hb_004994_070 Hb_011671_290--Hb_004994_070 Hb_001031_020 Hb_001031_020 Hb_000563_380--Hb_001031_020 Hb_005588_010 Hb_005588_010 Hb_000563_380--Hb_005588_010 Hb_045414_010 Hb_045414_010 Hb_000563_380--Hb_045414_010 Hb_000563_380--Hb_000635_170 Hb_033153_010 Hb_033153_010 Hb_000563_380--Hb_033153_010 Hb_013057_010 Hb_013057_010 Hb_000635_170--Hb_013057_010 Hb_000336_170 Hb_000336_170 Hb_000635_170--Hb_000336_170 Hb_028487_080 Hb_028487_080 Hb_000635_170--Hb_028487_080 Hb_000635_170--Hb_000045_110 Hb_006519_010 Hb_006519_010 Hb_000959_290--Hb_006519_010 Hb_000959_290--Hb_004994_070 Hb_001190_020 Hb_001190_020 Hb_000959_290--Hb_001190_020 Hb_000959_290--Hb_002572_060 Hb_093204_010 Hb_093204_010 Hb_000959_290--Hb_093204_010 Hb_000333_150 Hb_000333_150 Hb_000959_290--Hb_000333_150 Hb_004767_040 Hb_004767_040 Hb_000045_110--Hb_004767_040 Hb_001405_180 Hb_001405_180 Hb_000045_110--Hb_001405_180 Hb_039757_010 Hb_039757_010 Hb_000045_110--Hb_039757_010 Hb_000426_060 Hb_000426_060 Hb_000045_110--Hb_000426_060 Hb_002851_050 Hb_002851_050 Hb_000045_110--Hb_002851_050 Hb_002572_060--Hb_000610_030 Hb_013726_100 Hb_013726_100 Hb_002572_060--Hb_013726_100 Hb_002572_060--Hb_093204_010 Hb_002572_060--Hb_004994_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.016841 1.27657 0.0228885 0.105194 0.0070426 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.00533444 0.0285807

CAGE analysis