Hb_008948_110

Information

Type -
Description -
Location Contig8948: 125887-129774
Sequence    

Annotation

kegg
ID rcu:RCOM_0223760
description Peroxidase 25 precursor, putative (EC:1.11.1.7)
nr
ID XP_012078787.1
description PREDICTED: peroxidase 25 [Jatropha curcas]
swissprot
ID O80822
description Peroxidase 25 OS=Arabidopsis thaliana GN=PER25 PE=2 SV=2
trembl
ID A0A067KBL7
description Peroxidase OS=Jatropha curcas GN=JCGZ_13333 PE=3 SV=1
Gene Ontology
ID GO:0005576
description peroxidase 25

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61729: 126206-128780 , PASA_asmbl_61731: 128483-128662
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_008948_110 0.0 - - PREDICTED: peroxidase 25 [Jatropha curcas]
2 Hb_004112_050 0.1008370786 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
3 Hb_001956_160 0.1079248574 - - hypothetical protein L484_009438 [Morus notabilis]
4 Hb_002218_080 0.1083948398 - - Ankyrin repeat family protein, putative [Theobroma cacao]
5 Hb_001310_080 0.1087367671 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein AZF2-like [Jatropha curcas]
6 Hb_002234_200 0.1143476934 - - PREDICTED: inactive rhomboid protein 1 [Jatropha curcas]
7 Hb_005694_150 0.1205178687 - - PREDICTED: probable mitochondrial chaperone BCS1-A [Jatropha curcas]
8 Hb_005282_010 0.1215295621 - - PREDICTED: probable xyloglucan glycosyltransferase 12 [Populus euphratica]
9 Hb_001405_060 0.1221731972 - - PREDICTED: CBL-interacting serine/threonine-protein kinase 4-like [Jatropha curcas]
10 Hb_002110_050 0.1240449506 - - conserved hypothetical protein [Ricinus communis]
11 Hb_004241_100 0.1250760289 - - PREDICTED: transcription factor bHLH123-like isoform X1 [Populus euphratica]
12 Hb_096930_010 0.1262880989 - - hypothetical protein JCGZ_27059 [Jatropha curcas]
13 Hb_113396_010 0.1263044344 - - cytochrome P450, putative [Ricinus communis]
14 Hb_001104_270 0.1266787222 - - hypothetical protein POPTR_0007s13980g [Populus trichocarpa]
15 Hb_000032_230 0.1267668894 transcription factor TF Family: ERF hypothetical protein JCGZ_20463 [Jatropha curcas]
16 Hb_000780_110 0.1284062054 - - cation-transporting atpase plant, putative [Ricinus communis]
17 Hb_000024_020 0.129340804 - - PREDICTED: uncharacterized protein LOC105636896 [Jatropha curcas]
18 Hb_021254_020 0.1295640502 - - calmodulin binding protein, putative [Ricinus communis]
19 Hb_002936_030 0.1346774891 - - PREDICTED: uncharacterized protein LOC105633479 isoform X1 [Jatropha curcas]
20 Hb_032260_100 0.1351311423 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 53 [Jatropha curcas]

Gene co-expression network

sample Hb_008948_110 Hb_008948_110 Hb_004112_050 Hb_004112_050 Hb_008948_110--Hb_004112_050 Hb_001956_160 Hb_001956_160 Hb_008948_110--Hb_001956_160 Hb_002218_080 Hb_002218_080 Hb_008948_110--Hb_002218_080 Hb_001310_080 Hb_001310_080 Hb_008948_110--Hb_001310_080 Hb_002234_200 Hb_002234_200 Hb_008948_110--Hb_002234_200 Hb_005694_150 Hb_005694_150 Hb_008948_110--Hb_005694_150 Hb_004112_050--Hb_001310_080 Hb_004724_300 Hb_004724_300 Hb_004112_050--Hb_004724_300 Hb_004112_050--Hb_002218_080 Hb_007102_010 Hb_007102_010 Hb_004112_050--Hb_007102_010 Hb_007007_030 Hb_007007_030 Hb_004112_050--Hb_007007_030 Hb_113396_010 Hb_113396_010 Hb_004112_050--Hb_113396_010 Hb_160576_010 Hb_160576_010 Hb_001956_160--Hb_160576_010 Hb_000032_230 Hb_000032_230 Hb_001956_160--Hb_000032_230 Hb_000060_100 Hb_000060_100 Hb_001956_160--Hb_000060_100 Hb_032260_100 Hb_032260_100 Hb_001956_160--Hb_032260_100 Hb_002110_050 Hb_002110_050 Hb_001956_160--Hb_002110_050 Hb_002218_080--Hb_002110_050 Hb_002218_080--Hb_001310_080 Hb_002218_080--Hb_113396_010 Hb_002548_020 Hb_002548_020 Hb_002218_080--Hb_002548_020 Hb_000024_020 Hb_000024_020 Hb_002218_080--Hb_000024_020 Hb_001310_080--Hb_113396_010 Hb_026048_030 Hb_026048_030 Hb_001310_080--Hb_026048_030 Hb_001310_080--Hb_000024_020 Hb_001518_030 Hb_001518_030 Hb_001310_080--Hb_001518_030 Hb_001405_060 Hb_001405_060 Hb_002234_200--Hb_001405_060 Hb_005282_010 Hb_005282_010 Hb_002234_200--Hb_005282_010 Hb_013607_010 Hb_013607_010 Hb_002234_200--Hb_013607_010 Hb_000363_110 Hb_000363_110 Hb_002234_200--Hb_000363_110 Hb_098160_010 Hb_098160_010 Hb_002234_200--Hb_098160_010 Hb_050847_030 Hb_050847_030 Hb_005694_150--Hb_050847_030 Hb_000375_150 Hb_000375_150 Hb_005694_150--Hb_000375_150 Hb_000325_070 Hb_000325_070 Hb_005694_150--Hb_000325_070 Hb_000365_340 Hb_000365_340 Hb_005694_150--Hb_000365_340 Hb_013691_060 Hb_013691_060 Hb_005694_150--Hb_013691_060 Hb_000892_030 Hb_000892_030 Hb_005694_150--Hb_000892_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.436252 23.3194 10.3746 11.2991 0.408521 0.118301
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.87106 3.53122

CAGE analysis