Hb_009020_040

Information

Type -
Description -
Location Contig9020: 34962-40364
Sequence    

Annotation

kegg
ID rcu:RCOM_0811170
description Triacylglycerol lipase 1 precursor, putative (EC:3.1.1.3)
nr
ID XP_012075965.1
description PREDICTED: triacylglycerol lipase 1 isoform X1 [Jatropha curcas]
swissprot
ID Q71DJ5
description Triacylglycerol lipase 1 OS=Arabidopsis thaliana GN=LIP1 PE=1 SV=1
trembl
ID A0A067LFA2
description Lipase OS=Jatropha curcas GN=JCGZ_15473 PE=3 SV=1
Gene Ontology
ID GO:0005615
description triacylglycerol lipase 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61955: 38048-38961
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009020_040 0.0 - - PREDICTED: triacylglycerol lipase 1 isoform X1 [Jatropha curcas]
2 Hb_001220_050 0.0918410249 - - DNA-damage-inducible protein f, putative [Ricinus communis]
3 Hb_000200_350 0.0953792598 - - PREDICTED: uncharacterized protein LOC105636929 [Jatropha curcas]
4 Hb_000388_150 0.1001372299 - - hypothetical protein JCGZ_21651 [Jatropha curcas]
5 Hb_005250_010 0.1020231072 - - hypothetical protein JCGZ_15339 [Jatropha curcas]
6 Hb_002232_390 0.1031449603 - - PREDICTED: uncharacterized protein LOC105635994 [Jatropha curcas]
7 Hb_003475_020 0.1044247523 - - hypothetical protein JCGZ_13177 [Jatropha curcas]
8 Hb_000480_040 0.1046633681 - - PREDICTED: L-Ala-D/L-amino acid epimerase isoform X2 [Jatropha curcas]
9 Hb_000331_490 0.1057703964 - - PREDICTED: radical S-adenosyl methionine domain-containing protein 1, mitochondrial [Jatropha curcas]
10 Hb_001080_070 0.1068910536 - - 1,4-alpha-glucan branching enzyme [Manihot esculenta]
11 Hb_025477_050 0.1117810075 - - ABC transporter family protein [Hevea brasiliensis]
12 Hb_000261_050 0.1133933597 - - PREDICTED: probable magnesium transporter NIPA2 [Populus euphratica]
13 Hb_000309_020 0.1141333786 - - PREDICTED: uncharacterized protein LOC105641764 [Jatropha curcas]
14 Hb_007769_040 0.1142058986 - - PREDICTED: probable threonine--tRNA ligase, cytoplasmic [Jatropha curcas]
15 Hb_000613_110 0.1142460044 - - PREDICTED: uncharacterized protein LOC105641540 [Jatropha curcas]
16 Hb_016461_030 0.1145061283 - - PREDICTED: putative leucine--tRNA ligase, mitochondrial isoform X1 [Jatropha curcas]
17 Hb_004735_020 0.1150749118 - - PREDICTED: uncharacterized protein LOC105639315 [Jatropha curcas]
18 Hb_002282_070 0.1163693227 - - PREDICTED: protein DJ-1 homolog C isoform X2 [Jatropha curcas]
19 Hb_002685_060 0.1163817546 - - 30S ribosomal protein S5, putative [Ricinus communis]
20 Hb_013405_080 0.1171583525 - - PREDICTED: proline--tRNA ligase [Jatropha curcas]

Gene co-expression network

sample Hb_009020_040 Hb_009020_040 Hb_001220_050 Hb_001220_050 Hb_009020_040--Hb_001220_050 Hb_000200_350 Hb_000200_350 Hb_009020_040--Hb_000200_350 Hb_000388_150 Hb_000388_150 Hb_009020_040--Hb_000388_150 Hb_005250_010 Hb_005250_010 Hb_009020_040--Hb_005250_010 Hb_002232_390 Hb_002232_390 Hb_009020_040--Hb_002232_390 Hb_003475_020 Hb_003475_020 Hb_009020_040--Hb_003475_020 Hb_000345_370 Hb_000345_370 Hb_001220_050--Hb_000345_370 Hb_007769_040 Hb_007769_040 Hb_001220_050--Hb_007769_040 Hb_011861_050 Hb_011861_050 Hb_001220_050--Hb_011861_050 Hb_001723_030 Hb_001723_030 Hb_001220_050--Hb_001723_030 Hb_006198_130 Hb_006198_130 Hb_001220_050--Hb_006198_130 Hb_006006_060 Hb_006006_060 Hb_000200_350--Hb_006006_060 Hb_000934_110 Hb_000934_110 Hb_000200_350--Hb_000934_110 Hb_010344_030 Hb_010344_030 Hb_000200_350--Hb_010344_030 Hb_001157_230 Hb_001157_230 Hb_000200_350--Hb_001157_230 Hb_024184_010 Hb_024184_010 Hb_000200_350--Hb_024184_010 Hb_000480_040 Hb_000480_040 Hb_000388_150--Hb_000480_040 Hb_000388_150--Hb_006006_060 Hb_174865_040 Hb_174865_040 Hb_000388_150--Hb_174865_040 Hb_000388_150--Hb_010344_030 Hb_022693_130 Hb_022693_130 Hb_000388_150--Hb_022693_130 Hb_005062_060 Hb_005062_060 Hb_000388_150--Hb_005062_060 Hb_013405_080 Hb_013405_080 Hb_005250_010--Hb_013405_080 Hb_025477_050 Hb_025477_050 Hb_005250_010--Hb_025477_050 Hb_005914_040 Hb_005914_040 Hb_005250_010--Hb_005914_040 Hb_004218_190 Hb_004218_190 Hb_005250_010--Hb_004218_190 Hb_026053_040 Hb_026053_040 Hb_005250_010--Hb_026053_040 Hb_000033_110 Hb_000033_110 Hb_005250_010--Hb_000033_110 Hb_009178_060 Hb_009178_060 Hb_002232_390--Hb_009178_060 Hb_000645_280 Hb_000645_280 Hb_002232_390--Hb_000645_280 Hb_002232_390--Hb_003475_020 Hb_000684_210 Hb_000684_210 Hb_002232_390--Hb_000684_210 Hb_007763_070 Hb_007763_070 Hb_002232_390--Hb_007763_070 Hb_001449_070 Hb_001449_070 Hb_002232_390--Hb_001449_070 Hb_003994_110 Hb_003994_110 Hb_003475_020--Hb_003994_110 Hb_001790_080 Hb_001790_080 Hb_003475_020--Hb_001790_080 Hb_000676_200 Hb_000676_200 Hb_003475_020--Hb_000676_200 Hb_000130_320 Hb_000130_320 Hb_003475_020--Hb_000130_320 Hb_002282_070 Hb_002282_070 Hb_003475_020--Hb_002282_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
2.55077 1.68938 4.92224 5.89615 3.88601 3.37528
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
2.71713 2.11184 2.99517 2.59206 12.9621

CAGE analysis