Hb_009048_040

Information

Type -
Description -
Location Contig9048: 64831-70792
Sequence    

Annotation

kegg
ID rcu:RCOM_0814350
description hypothetical protein
nr
ID XP_012081327.1
description PREDICTED: uncharacterized protein LOC105641407 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KCP7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_18587 PE=4 SV=1
Gene Ontology
ID GO:0005488
description PREDICTED: uncharacterized protein LOC105641407

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_61990: 67869-68163
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009048_040 0.0 - - PREDICTED: uncharacterized protein LOC105641407 [Jatropha curcas]
2 Hb_005754_060 0.0638476468 - - conserved hypothetical protein [Ricinus communis]
3 Hb_004109_090 0.0814577608 - - ubiquitin-protein ligase, putative [Ricinus communis]
4 Hb_003195_070 0.0845482349 - - Uncharacterized protein isoform 1 [Theobroma cacao]
5 Hb_005489_110 0.0867871847 - - PREDICTED: putative transferase CAF17 homolog, mitochondrial [Jatropha curcas]
6 Hb_000080_190 0.0871328479 - - -
7 Hb_002506_020 0.0885570477 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP21-1-like isoform X1 [Populus euphratica]
8 Hb_085781_010 0.0896005618 - - PREDICTED: protein root UVB sensitive 4 [Jatropha curcas]
9 Hb_003929_160 0.0900583321 - - PREDICTED: pyruvate dehydrogenase (acetyl-transferring) kinase, mitochondrial [Jatropha curcas]
10 Hb_000023_140 0.0904865337 - - PREDICTED: cadmium-induced protein AS8 isoform X1 [Jatropha curcas]
11 Hb_000069_110 0.0909882975 - - PREDICTED: nephrocystin-3-like isoform X2 [Jatropha curcas]
12 Hb_006472_010 0.0914411736 - - hypothetical protein CICLE_v10028249mg [Citrus clementina]
13 Hb_000395_170 0.0928946774 - - PREDICTED: probable transcriptional regulatory protein At2g25830 [Jatropha curcas]
14 Hb_007951_050 0.0938922738 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
15 Hb_003195_060 0.0939694578 - - PREDICTED: transmembrane protein 184 homolog DDB_G0279555 [Jatropha curcas]
16 Hb_000172_370 0.0942203598 - - -
17 Hb_004109_190 0.0944303856 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like isoform X2 [Populus euphratica]
18 Hb_003005_020 0.0973465215 - - PREDICTED: DNA repair protein XRCC3 homolog [Jatropha curcas]
19 Hb_001454_210 0.0974228434 - - PREDICTED: uncharacterized protein LOC105643435 [Jatropha curcas]
20 Hb_004976_030 0.0974934227 - - hypothetical protein POPTR_0005s04700g [Populus trichocarpa]

Gene co-expression network

sample Hb_009048_040 Hb_009048_040 Hb_005754_060 Hb_005754_060 Hb_009048_040--Hb_005754_060 Hb_004109_090 Hb_004109_090 Hb_009048_040--Hb_004109_090 Hb_003195_070 Hb_003195_070 Hb_009048_040--Hb_003195_070 Hb_005489_110 Hb_005489_110 Hb_009048_040--Hb_005489_110 Hb_000080_190 Hb_000080_190 Hb_009048_040--Hb_000080_190 Hb_002506_020 Hb_002506_020 Hb_009048_040--Hb_002506_020 Hb_071736_010 Hb_071736_010 Hb_005754_060--Hb_071736_010 Hb_005883_050 Hb_005883_050 Hb_005754_060--Hb_005883_050 Hb_000395_170 Hb_000395_170 Hb_005754_060--Hb_000395_170 Hb_000023_140 Hb_000023_140 Hb_005754_060--Hb_000023_140 Hb_001454_210 Hb_001454_210 Hb_005754_060--Hb_001454_210 Hb_003175_010 Hb_003175_010 Hb_004109_090--Hb_003175_010 Hb_003929_160 Hb_003929_160 Hb_004109_090--Hb_003929_160 Hb_000409_020 Hb_000409_020 Hb_004109_090--Hb_000409_020 Hb_004724_200 Hb_004724_200 Hb_004109_090--Hb_004724_200 Hb_001818_090 Hb_001818_090 Hb_004109_090--Hb_001818_090 Hb_005663_060 Hb_005663_060 Hb_004109_090--Hb_005663_060 Hb_003195_070--Hb_002506_020 Hb_000010_330 Hb_000010_330 Hb_003195_070--Hb_000010_330 Hb_007904_200 Hb_007904_200 Hb_003195_070--Hb_007904_200 Hb_048937_040 Hb_048937_040 Hb_003195_070--Hb_048937_040 Hb_003195_070--Hb_004109_090 Hb_002200_080 Hb_002200_080 Hb_003195_070--Hb_002200_080 Hb_005489_110--Hb_003195_070 Hb_007426_030 Hb_007426_030 Hb_005489_110--Hb_007426_030 Hb_001623_510 Hb_001623_510 Hb_005489_110--Hb_001623_510 Hb_005489_110--Hb_004109_090 Hb_001975_140 Hb_001975_140 Hb_005489_110--Hb_001975_140 Hb_002687_110 Hb_002687_110 Hb_000080_190--Hb_002687_110 Hb_005625_020 Hb_005625_020 Hb_000080_190--Hb_005625_020 Hb_000898_040 Hb_000898_040 Hb_000080_190--Hb_000898_040 Hb_004738_040 Hb_004738_040 Hb_000080_190--Hb_004738_040 Hb_000080_190--Hb_000409_020 Hb_000025_140 Hb_000025_140 Hb_002506_020--Hb_000025_140 Hb_000451_010 Hb_000451_010 Hb_002506_020--Hb_000451_010 Hb_002506_020--Hb_000395_170 Hb_002506_020--Hb_048937_040 Hb_002506_020--Hb_007904_200
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.34945 1.48052 1.91401 2.68413 6.17605 7.83024
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.40958 5.12699 8.0723 1.75674 2.86245

CAGE analysis