Hb_009051_030

Information

Type -
Description -
Location Contig9051: 46762-47987
Sequence    

Annotation

kegg
ID rcu:RCOM_0330660
description Thioredoxin I, putative
nr
ID XP_012087817.1
description PREDICTED: thioredoxin O1, mitochondrial-like [Jatropha curcas]
swissprot
ID O64764
description Thioredoxin O1, mitochondrial OS=Arabidopsis thaliana GN=At2g35010 PE=2 SV=1
trembl
ID A0A067JX57
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_26541 PE=4 SV=1
Gene Ontology
ID GO:0005759
description thioredoxin o1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62023: 11404-47856
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009051_030 0.0 - - PREDICTED: thioredoxin O1, mitochondrial-like [Jatropha curcas]
2 Hb_000102_020 0.0679169761 - - hypothetical protein JCGZ_11933 [Jatropha curcas]
3 Hb_003787_010 0.0710346693 - - PREDICTED: 40S ribosomal protein S3-3-like [Phoenix dactylifera]
4 Hb_001057_040 0.0735065343 - - PREDICTED: oligosaccharyltransferase complex subunit ostc [Jatropha curcas]
5 Hb_005784_110 0.0756837109 - - PREDICTED: dolichol-phosphate mannosyltransferase-like isoform X1 [Citrus sinensis]
6 Hb_000656_170 0.0758509361 - - lsm1, putative [Ricinus communis]
7 Hb_000574_480 0.076894958 - - PREDICTED: uncharacterized protein LOC105634837 [Jatropha curcas]
8 Hb_000009_460 0.0772309801 - - conserved hypothetical protein [Ricinus communis]
9 Hb_159809_020 0.0780776879 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
10 Hb_006816_530 0.0790815872 - - 60S ribosomal protein L18, putative [Ricinus communis]
11 Hb_172426_040 0.0794072294 - - PREDICTED: ELL-associated factor 1 [Jatropha curcas]
12 Hb_000058_060 0.0803027347 - - PREDICTED: protein-tyrosine-phosphatase IBR5 [Jatropha curcas]
13 Hb_000982_090 0.0804754764 - - PREDICTED: zinc finger HIT domain-containing protein 3 [Jatropha curcas]
14 Hb_007441_040 0.0814997669 - - PREDICTED: protein mago nashi homolog [Jatropha curcas]
15 Hb_001814_050 0.0816764823 - - PREDICTED: single-stranded DNA-binding protein, mitochondrial isoform X1 [Jatropha curcas]
16 Hb_004032_010 0.0832006262 - - PREDICTED: uncharacterized protein LOC105635123 [Jatropha curcas]
17 Hb_000479_090 0.0848297864 - - PREDICTED: zinc finger RNA-binding protein [Jatropha curcas]
18 Hb_001369_640 0.0859726447 - - PREDICTED: 40S ribosomal protein S20-1 [Jatropha curcas]
19 Hb_015279_010 0.0861410779 - - PREDICTED: E3 ubiquitin-protein ligase RING1 [Jatropha curcas]
20 Hb_033834_040 0.0866290309 - - conserved hypothetical protein [Ricinus communis]

Gene co-expression network

sample Hb_009051_030 Hb_009051_030 Hb_000102_020 Hb_000102_020 Hb_009051_030--Hb_000102_020 Hb_003787_010 Hb_003787_010 Hb_009051_030--Hb_003787_010 Hb_001057_040 Hb_001057_040 Hb_009051_030--Hb_001057_040 Hb_005784_110 Hb_005784_110 Hb_009051_030--Hb_005784_110 Hb_000656_170 Hb_000656_170 Hb_009051_030--Hb_000656_170 Hb_000574_480 Hb_000574_480 Hb_009051_030--Hb_000574_480 Hb_007441_040 Hb_007441_040 Hb_000102_020--Hb_007441_040 Hb_000261_140 Hb_000261_140 Hb_000102_020--Hb_000261_140 Hb_000102_020--Hb_000656_170 Hb_009182_010 Hb_009182_010 Hb_000102_020--Hb_009182_010 Hb_001214_160 Hb_001214_160 Hb_000102_020--Hb_001214_160 Hb_000217_030 Hb_000217_030 Hb_003787_010--Hb_000217_030 Hb_002995_020 Hb_002995_020 Hb_003787_010--Hb_002995_020 Hb_172426_040 Hb_172426_040 Hb_003787_010--Hb_172426_040 Hb_005846_040 Hb_005846_040 Hb_003787_010--Hb_005846_040 Hb_000020_060 Hb_000020_060 Hb_003787_010--Hb_000020_060 Hb_015279_010 Hb_015279_010 Hb_003787_010--Hb_015279_010 Hb_000701_100 Hb_000701_100 Hb_001057_040--Hb_000701_100 Hb_009615_070 Hb_009615_070 Hb_001057_040--Hb_009615_070 Hb_018124_010 Hb_018124_010 Hb_001057_040--Hb_018124_010 Hb_008695_050 Hb_008695_050 Hb_001057_040--Hb_008695_050 Hb_000406_080 Hb_000406_080 Hb_001057_040--Hb_000406_080 Hb_002518_080 Hb_002518_080 Hb_005784_110--Hb_002518_080 Hb_000505_040 Hb_000505_040 Hb_005784_110--Hb_000505_040 Hb_004738_100 Hb_004738_100 Hb_005784_110--Hb_004738_100 Hb_003605_090 Hb_003605_090 Hb_005784_110--Hb_003605_090 Hb_003108_020 Hb_003108_020 Hb_005784_110--Hb_003108_020 Hb_004032_010 Hb_004032_010 Hb_000656_170--Hb_004032_010 Hb_000656_170--Hb_003108_020 Hb_000656_170--Hb_007441_040 Hb_000479_190 Hb_000479_190 Hb_000656_170--Hb_000479_190 Hb_003656_070 Hb_003656_070 Hb_000574_480--Hb_003656_070 Hb_001998_050 Hb_001998_050 Hb_000574_480--Hb_001998_050 Hb_002963_010 Hb_002963_010 Hb_000574_480--Hb_002963_010 Hb_008173_090 Hb_008173_090 Hb_000574_480--Hb_008173_090 Hb_012675_060 Hb_012675_060 Hb_000574_480--Hb_012675_060 Hb_000173_220 Hb_000173_220 Hb_000574_480--Hb_000173_220
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
46.9245 25.9945 23.9531 41.7478 25.8331 54.5663
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
66.0159 97.9835 55.1781 33.3105 19.2405

CAGE analysis