Hb_009066_010

Information

Type -
Description -
Location Contig9066: 27524-38499
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009066_010 0.0 - - -
2 Hb_068347_020 0.0050985263 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
3 Hb_027394_010 0.0051198321 - - PREDICTED: uncharacterized protein LOC104216022, partial [Nicotiana sylvestris]
4 Hb_021068_020 0.0208635692 - - -
5 Hb_136856_010 0.0388479136 - - PREDICTED: uncharacterized protein LOC105436302 [Cucumis sativus]
6 Hb_089491_010 0.0783261326 - - -
7 Hb_009268_110 0.0802308592 - - PREDICTED: uncharacterized protein LOC102611294 [Citrus sinensis]
8 Hb_013205_010 0.082225706 - - PREDICTED: putative B3 domain-containing protein At2g27410 [Jatropha curcas]
9 Hb_010399_020 0.1145065538 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
10 Hb_008151_030 0.1183922185 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
11 Hb_034667_010 0.1248606093 - - -
12 Hb_013727_010 0.1286376198 - - hypothetical protein JCGZ_08656 [Jatropha curcas]
13 Hb_000260_190 0.1289967334 - - -
14 Hb_002400_450 0.1314246309 - - PREDICTED: protein MEMO1 isoform X2 [Sesamum indicum]
15 Hb_003400_030 0.1361220767 - - PREDICTED: uncharacterized protein LOC104234330 [Nicotiana sylvestris]
16 Hb_000944_010 0.1362197224 - - PREDICTED: uncharacterized protein LOC105631113 [Jatropha curcas]
17 Hb_008473_010 0.1468241439 - - PREDICTED: laccase-14-like [Jatropha curcas]
18 Hb_091369_010 0.1477999321 - - -
19 Hb_002673_050 0.1498149964 - - -
20 Hb_005542_020 0.1735544023 - - lupus la ribonucleoprotein, putative [Ricinus communis]

Gene co-expression network

sample Hb_009066_010 Hb_009066_010 Hb_068347_020 Hb_068347_020 Hb_009066_010--Hb_068347_020 Hb_027394_010 Hb_027394_010 Hb_009066_010--Hb_027394_010 Hb_021068_020 Hb_021068_020 Hb_009066_010--Hb_021068_020 Hb_136856_010 Hb_136856_010 Hb_009066_010--Hb_136856_010 Hb_089491_010 Hb_089491_010 Hb_009066_010--Hb_089491_010 Hb_009268_110 Hb_009268_110 Hb_009066_010--Hb_009268_110 Hb_068347_020--Hb_027394_010 Hb_068347_020--Hb_021068_020 Hb_068347_020--Hb_136856_010 Hb_013205_010 Hb_013205_010 Hb_068347_020--Hb_013205_010 Hb_068347_020--Hb_089491_010 Hb_027394_010--Hb_021068_020 Hb_027394_010--Hb_136856_010 Hb_027394_010--Hb_013205_010 Hb_027394_010--Hb_089491_010 Hb_021068_020--Hb_136856_010 Hb_021068_020--Hb_089491_010 Hb_021068_020--Hb_009268_110 Hb_136856_010--Hb_089491_010 Hb_136856_010--Hb_009268_110 Hb_089491_010--Hb_009268_110 Hb_013727_010 Hb_013727_010 Hb_089491_010--Hb_013727_010 Hb_009268_110--Hb_013727_010 Hb_009268_110--Hb_068347_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0 0 0.0579635 0.104217
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis