Hb_009078_030

Information

Type -
Description -
Location Contig9078: 37859-40687
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa016992mg
description hypothetical protein
nr
ID XP_007201135.1
description hypothetical protein PRUPE_ppa016992mg, partial [Prunus persica]
swissprot
ID Q9SQX6
description Serine carboxypeptidase-like 7 OS=Arabidopsis thaliana GN=SCPL7 PE=2 SV=1
trembl
ID M5VMC2
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa016992mg PE=4 SV=1
Gene Ontology
ID GO:0004185
description serine carboxypeptidase-like 18

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009078_030 0.0 - - hypothetical protein PRUPE_ppa016992mg, partial [Prunus persica]
2 Hb_001951_060 0.1114902524 - - PREDICTED: UDP-N-acetylglucosamine transferase subunit ALG14 [Jatropha curcas]
3 Hb_002902_140 0.1186614563 - - PREDICTED: probable prolyl 4-hydroxylase 9 [Jatropha curcas]
4 Hb_016219_010 0.1254601114 - - hypothetical protein B456_001G213800 [Gossypium raimondii]
5 Hb_000768_160 0.1269110544 - - PREDICTED: uncharacterized protein LOC105632531 [Jatropha curcas]
6 Hb_001799_060 0.1307483855 - - Rab6 [Hevea brasiliensis]
7 Hb_002631_130 0.1336829796 - - PREDICTED: L-ascorbate oxidase-like [Jatropha curcas]
8 Hb_034083_020 0.134416598 - - conserved hypothetical protein [Ricinus communis]
9 Hb_008147_080 0.1369045847 - - PREDICTED: uncharacterized protein LOC105646805 isoform X2 [Jatropha curcas]
10 Hb_002093_060 0.1397585026 - - phosphoprotein phosphatase, putative [Ricinus communis]
11 Hb_002486_080 0.1403763641 - - PREDICTED: cytosolic endo-beta-N-acetylglucosaminidase isoform X1 [Jatropha curcas]
12 Hb_000172_280 0.1407778194 - - aspartate aminotransferase, putative [Ricinus communis]
13 Hb_002928_200 0.1416184552 - - PREDICTED: Niemann-Pick C1 protein-like [Jatropha curcas]
14 Hb_003602_020 0.142764393 - - PREDICTED: serine hydroxymethyltransferase, mitochondrial-like [Jatropha curcas]
15 Hb_014497_060 0.1452168343 - - phosphofructokinase, putative [Ricinus communis]
16 Hb_002281_020 0.145856836 - - PREDICTED: actin-related protein 8 [Jatropha curcas]
17 Hb_012022_050 0.1463807697 - - hypothetical protein EUGRSUZ_B02804 [Eucalyptus grandis]
18 Hb_006185_030 0.1473046997 - - threonine synthase, putative [Ricinus communis]
19 Hb_000197_190 0.1476668714 - - PREDICTED: diaminopimelate decarboxylase 2, chloroplastic-like [Jatropha curcas]
20 Hb_000896_050 0.1477612295 - - PREDICTED: uncharacterized protein LOC105637668 [Jatropha curcas]

Gene co-expression network

sample Hb_009078_030 Hb_009078_030 Hb_001951_060 Hb_001951_060 Hb_009078_030--Hb_001951_060 Hb_002902_140 Hb_002902_140 Hb_009078_030--Hb_002902_140 Hb_016219_010 Hb_016219_010 Hb_009078_030--Hb_016219_010 Hb_000768_160 Hb_000768_160 Hb_009078_030--Hb_000768_160 Hb_001799_060 Hb_001799_060 Hb_009078_030--Hb_001799_060 Hb_002631_130 Hb_002631_130 Hb_009078_030--Hb_002631_130 Hb_001301_280 Hb_001301_280 Hb_001951_060--Hb_001301_280 Hb_034083_020 Hb_034083_020 Hb_001951_060--Hb_034083_020 Hb_002486_080 Hb_002486_080 Hb_001951_060--Hb_002486_080 Hb_007416_070 Hb_007416_070 Hb_001951_060--Hb_007416_070 Hb_000365_010 Hb_000365_010 Hb_001951_060--Hb_000365_010 Hb_005016_010 Hb_005016_010 Hb_001951_060--Hb_005016_010 Hb_014497_060 Hb_014497_060 Hb_002902_140--Hb_014497_060 Hb_019654_020 Hb_019654_020 Hb_002902_140--Hb_019654_020 Hb_002249_080 Hb_002249_080 Hb_002902_140--Hb_002249_080 Hb_000007_060 Hb_000007_060 Hb_002902_140--Hb_000007_060 Hb_106890_010 Hb_106890_010 Hb_002902_140--Hb_106890_010 Hb_003355_010 Hb_003355_010 Hb_002902_140--Hb_003355_010 Hb_001105_040 Hb_001105_040 Hb_016219_010--Hb_001105_040 Hb_016219_030 Hb_016219_030 Hb_016219_010--Hb_016219_030 Hb_001578_020 Hb_001578_020 Hb_016219_010--Hb_001578_020 Hb_016219_010--Hb_001951_060 Hb_016219_010--Hb_001301_280 Hb_001242_120 Hb_001242_120 Hb_016219_010--Hb_001242_120 Hb_002928_200 Hb_002928_200 Hb_000768_160--Hb_002928_200 Hb_055062_040 Hb_055062_040 Hb_000768_160--Hb_055062_040 Hb_002093_060 Hb_002093_060 Hb_000768_160--Hb_002093_060 Hb_009615_060 Hb_009615_060 Hb_000768_160--Hb_009615_060 Hb_000768_160--Hb_002631_130 Hb_084670_010 Hb_084670_010 Hb_000768_160--Hb_084670_010 Hb_000197_190 Hb_000197_190 Hb_001799_060--Hb_000197_190 Hb_001946_310 Hb_001946_310 Hb_001799_060--Hb_001946_310 Hb_005648_010 Hb_005648_010 Hb_001799_060--Hb_005648_010 Hb_000800_090 Hb_000800_090 Hb_001799_060--Hb_000800_090 Hb_004880_150 Hb_004880_150 Hb_001799_060--Hb_004880_150 Hb_000165_080 Hb_000165_080 Hb_001799_060--Hb_000165_080 Hb_002631_130--Hb_009615_060 Hb_002631_130--Hb_000197_190 Hb_000494_030 Hb_000494_030 Hb_002631_130--Hb_000494_030 Hb_000683_050 Hb_000683_050 Hb_002631_130--Hb_000683_050 Hb_000548_070 Hb_000548_070 Hb_002631_130--Hb_000548_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.341948 0.46974 1.65053 2.89111 0.362435 0.728808
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.10296 1.14129 0.41693 3.35077 3.0563

CAGE analysis