Hb_009102_020

Information

Type -
Description -
Location Contig9102: 21139-21552
Sequence    

Annotation

kegg
ID egr:104420544
description proline-rich receptor-like protein kinase PERK7
nr
ID KCW55342.1
description hypothetical protein EUGRSUZ_I01262 [Eucalyptus grandis]
swissprot
ID P0DH62
description Inactive protein kinase SELMODRAFT_444075 OS=Selaginella moellendorffii GN=SELMODRAFT_444075 PE=2 SV=1
trembl
ID A0A059AMY0
description Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01262 PE=4 SV=1
Gene Ontology
ID GO:0004672
description proline-rich receptor-like protein kinase perk1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009102_020 0.0 - - hypothetical protein EUGRSUZ_I01262 [Eucalyptus grandis]
2 Hb_000377_140 0.1716044093 - - -
3 Hb_002235_270 0.2162399897 transcription factor TF Family: NAC PREDICTED: NAC domain-containing protein 100 [Jatropha curcas]
4 Hb_000438_150 0.2382333972 transcription factor TF Family: HMG PREDICTED: high mobility group B protein 7 [Jatropha curcas]
5 Hb_144547_010 0.2383169197 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
6 Hb_003906_030 0.246696582 - - mads box protein, putative [Ricinus communis]
7 Hb_035761_010 0.2479159024 - - hypothetical protein CISIN_1g022501mg [Citrus sinensis]
8 Hb_009372_050 0.271036765 - - unnamed protein product [Vitis vinifera]
9 Hb_000242_020 0.2736869152 - - hypothetical protein CICLE_v100246891mg, partial [Citrus clementina]
10 Hb_023051_010 0.2758812931 - - PREDICTED: putative amidase C869.01 [Populus euphratica]
11 Hb_000258_360 0.2759308786 - - PREDICTED: uncharacterized protein LOC104455487 [Eucalyptus grandis]
12 Hb_007545_200 0.2765140239 - - Pectinesterase-3 precursor, putative [Ricinus communis]
13 Hb_025595_010 0.2773692775 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
14 Hb_000099_190 0.2784732496 - - PREDICTED: putative cell division cycle ATPase [Jatropha curcas]
15 Hb_065841_010 0.2835645609 - - hypothetical protein JCGZ_18376 [Jatropha curcas]
16 Hb_123560_030 0.2839253898 - - UDP-glucosyltransferase, putative [Ricinus communis]
17 Hb_177152_010 0.2842486608 - - glycosyl hydrolase family 38 family protein [Populus trichocarpa]
18 Hb_002965_180 0.2870756711 - - AMSH-like ubiquitin thioesterase 3 [Morus notabilis]
19 Hb_000311_030 0.2915397468 - - hypothetical protein B456_002G227600 [Gossypium raimondii]
20 Hb_000960_020 0.2916552018 - - -

Gene co-expression network

sample Hb_009102_020 Hb_009102_020 Hb_000377_140 Hb_000377_140 Hb_009102_020--Hb_000377_140 Hb_002235_270 Hb_002235_270 Hb_009102_020--Hb_002235_270 Hb_000438_150 Hb_000438_150 Hb_009102_020--Hb_000438_150 Hb_144547_010 Hb_144547_010 Hb_009102_020--Hb_144547_010 Hb_003906_030 Hb_003906_030 Hb_009102_020--Hb_003906_030 Hb_035761_010 Hb_035761_010 Hb_009102_020--Hb_035761_010 Hb_000377_140--Hb_144547_010 Hb_123560_030 Hb_123560_030 Hb_000377_140--Hb_123560_030 Hb_023051_010 Hb_023051_010 Hb_000377_140--Hb_023051_010 Hb_000982_150 Hb_000982_150 Hb_000377_140--Hb_000982_150 Hb_004052_160 Hb_004052_160 Hb_000377_140--Hb_004052_160 Hb_065841_010 Hb_065841_010 Hb_002235_270--Hb_065841_010 Hb_001001_050 Hb_001001_050 Hb_002235_270--Hb_001001_050 Hb_000311_030 Hb_000311_030 Hb_002235_270--Hb_000311_030 Hb_068569_010 Hb_068569_010 Hb_002235_270--Hb_068569_010 Hb_000979_010 Hb_000979_010 Hb_002235_270--Hb_000979_010 Hb_009476_150 Hb_009476_150 Hb_000438_150--Hb_009476_150 Hb_000099_190 Hb_000099_190 Hb_000438_150--Hb_000099_190 Hb_000732_240 Hb_000732_240 Hb_000438_150--Hb_000732_240 Hb_048944_020 Hb_048944_020 Hb_000438_150--Hb_048944_020 Hb_002196_010 Hb_002196_010 Hb_000438_150--Hb_002196_010 Hb_007157_060 Hb_007157_060 Hb_000438_150--Hb_007157_060 Hb_047560_010 Hb_047560_010 Hb_144547_010--Hb_047560_010 Hb_144547_010--Hb_000438_150 Hb_143933_010 Hb_143933_010 Hb_144547_010--Hb_143933_010 Hb_000197_170 Hb_000197_170 Hb_144547_010--Hb_000197_170 Hb_000960_020 Hb_000960_020 Hb_003906_030--Hb_000960_020 Hb_091336_010 Hb_091336_010 Hb_003906_030--Hb_091336_010 Hb_007545_200 Hb_007545_200 Hb_003906_030--Hb_007545_200 Hb_003925_130 Hb_003925_130 Hb_003906_030--Hb_003925_130 Hb_000304_040 Hb_000304_040 Hb_003906_030--Hb_000304_040 Hb_020805_160 Hb_020805_160 Hb_003906_030--Hb_020805_160 Hb_035761_010--Hb_000099_190 Hb_035761_010--Hb_000732_240 Hb_187021_010 Hb_187021_010 Hb_035761_010--Hb_187021_010 Hb_101370_010 Hb_101370_010 Hb_035761_010--Hb_101370_010 Hb_154538_010 Hb_154538_010 Hb_035761_010--Hb_154538_010 Hb_035761_010--Hb_048944_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
17.1409 12.802 6.07674 37.2019 0.520798 10.2009
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0.260669

CAGE analysis