Hb_009139_010

Information

Type -
Description -
Location Contig9139: 2236-3735
Sequence    

Annotation

kegg
ID egr:104436439
description phospholipid:diacylglycerol acyltransferase 1-like
nr
ID AEQ94116.1
description putative Phospholipid-Diacylglycerol acyltransferase [Elaeis guineensis]
swissprot
ID Q9FNA9
description Phospholipid:diacylglycerol acyltransferase 1 OS=Arabidopsis thaliana GN=PDAT1 PE=2 SV=1
trembl
ID G8FGG2
description Putative Phospholipid-Diacylglycerol acyltransferase (Fragment) OS=Elaeis guineensis var. tenera GN=PDAT PE=2 SV=1
Gene Ontology
ID GO:0005773
description phospholipid:diacylglycerol acyltransferase 1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009139_010 0.0 - - putative Phospholipid-Diacylglycerol acyltransferase [Elaeis guineensis]
2 Hb_008667_050 0.2175007044 - - PREDICTED: serine/threonine-protein kinase HT1-like [Malus domestica]
3 Hb_000179_150 0.2207444126 - - hypothetical protein ZEAMMB73_153699 [Zea mays]
4 Hb_001047_140 0.2324622179 - - -
5 Hb_000189_360 0.2327452199 - - Calcium-transporting ATPase 12, plasma membrane-type [Morus notabilis]
6 Hb_000529_240 0.2446484001 - - -
7 Hb_001495_060 0.2484663276 - - PREDICTED: probable aldo-keto reductase 1 [Jatropha curcas]
8 Hb_000453_210 0.2591528922 - - hypothetical protein PHAVU_006G019800g [Phaseolus vulgaris]
9 Hb_114839_010 0.2665881959 - - -
10 Hb_001364_030 0.2695725723 - - hypothetical protein JCGZ_19531 [Jatropha curcas]
11 Hb_000363_140 0.2701325278 - - hypothetical protein CICLE_v10009052mg [Citrus clementina]
12 Hb_004296_020 0.271112398 - - unnamed protein product [Coffea canephora]
13 Hb_001143_010 0.272115906 - - -
14 Hb_000122_040 0.2742069916 - - PREDICTED: uncharacterized protein LOC105649224 [Jatropha curcas]
15 Hb_005701_030 0.2746971688 - - conserved hypothetical protein [Ricinus communis]
16 Hb_003592_070 0.2762599167 - - -
17 Hb_002471_160 0.2787548907 transcription factor TF Family: C2H2 PREDICTED: zinc finger protein 4-like [Populus euphratica]
18 Hb_003992_110 0.2840515571 - - hypothetical protein VITISV_016971 [Vitis vinifera]
19 Hb_000275_040 0.284443987 - - hypothetical protein PRUPE_ppa015000mg [Prunus persica]
20 Hb_000331_320 0.2863623833 - - -

Gene co-expression network

sample Hb_009139_010 Hb_009139_010 Hb_008667_050 Hb_008667_050 Hb_009139_010--Hb_008667_050 Hb_000179_150 Hb_000179_150 Hb_009139_010--Hb_000179_150 Hb_001047_140 Hb_001047_140 Hb_009139_010--Hb_001047_140 Hb_000189_360 Hb_000189_360 Hb_009139_010--Hb_000189_360 Hb_000529_240 Hb_000529_240 Hb_009139_010--Hb_000529_240 Hb_001495_060 Hb_001495_060 Hb_009139_010--Hb_001495_060 Hb_000331_320 Hb_000331_320 Hb_008667_050--Hb_000331_320 Hb_008667_050--Hb_001047_140 Hb_000453_210 Hb_000453_210 Hb_008667_050--Hb_000453_210 Hb_003209_030 Hb_003209_030 Hb_008667_050--Hb_003209_030 Hb_005690_020 Hb_005690_020 Hb_008667_050--Hb_005690_020 Hb_008667_050--Hb_000529_240 Hb_084889_010 Hb_084889_010 Hb_000179_150--Hb_084889_010 Hb_133311_010 Hb_133311_010 Hb_000179_150--Hb_133311_010 Hb_109578_010 Hb_109578_010 Hb_000179_150--Hb_109578_010 Hb_000713_020 Hb_000713_020 Hb_000179_150--Hb_000713_020 Hb_000179_150--Hb_001495_060 Hb_001047_140--Hb_000331_320 Hb_001864_030 Hb_001864_030 Hb_001047_140--Hb_001864_030 Hb_001047_140--Hb_000453_210 Hb_000331_310 Hb_000331_310 Hb_001047_140--Hb_000331_310 Hb_004502_080 Hb_004502_080 Hb_001047_140--Hb_004502_080 Hb_114839_010 Hb_114839_010 Hb_000189_360--Hb_114839_010 Hb_007451_060 Hb_007451_060 Hb_000189_360--Hb_007451_060 Hb_003992_110 Hb_003992_110 Hb_000189_360--Hb_003992_110 Hb_000189_360--Hb_000713_020 Hb_000189_360--Hb_000179_150 Hb_000529_240--Hb_003209_030 Hb_000529_240--Hb_001495_060 Hb_000529_240--Hb_000331_320 Hb_000529_240--Hb_001047_140 Hb_000529_240--Hb_000453_210 Hb_001495_060--Hb_000453_210 Hb_002685_180 Hb_002685_180 Hb_001495_060--Hb_002685_180 Hb_001495_060--Hb_003209_030 Hb_001143_010 Hb_001143_010 Hb_001495_060--Hb_001143_010 Hb_001495_060--Hb_001047_140
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.276222 0.761684 0 0.0860277 0.119094 0.297935
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
1.27475 1.00188 0.135178 0 0

CAGE analysis