Hb_009150_060

Information

Type -
Description -
Location Contig9150: 38280-49565
Sequence    

Annotation

kegg
ID pmum:103341998
description cytochrome P450 CYP749A22-like
nr
ID XP_008243777.1
description PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
swissprot
ID Q05047
description Secologanin synthase OS=Catharanthus roseus GN=CYP72A1 PE=2 SV=1
trembl
ID A0A061EH17
description Secologanin synthase, putative OS=Theobroma cacao GN=TCM_011456 PE=4 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 cyp749a22-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009150_060 0.0 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
2 Hb_001300_140 0.0702333227 - - -
3 Hb_004010_090 0.0783787025 - - ATP binding protein, putative [Ricinus communis]
4 Hb_000836_260 0.0885720602 - - PREDICTED: probable polygalacturonase [Jatropha curcas]
5 Hb_004128_090 0.090780484 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]
6 Hb_011440_010 0.0920262559 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
7 Hb_010839_010 0.0937801742 - - receptor-kinase, putative [Ricinus communis]
8 Hb_002475_030 0.0960205363 - - conserved hypothetical protein [Ricinus communis]
9 Hb_004586_110 0.0971230755 - - Aspartic proteinase nepenthesin-1 precursor, putative [Ricinus communis]
10 Hb_001358_120 0.0986041472 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
11 Hb_003842_010 0.1013173369 - - receptor protein kinase, putative [Ricinus communis]
12 Hb_009812_010 0.1117936144 - - ABC transporter family protein [Hevea brasiliensis]
13 Hb_000203_080 0.1184140137 - - Xylem bark cysteine peptidase 3 isoform 1 [Theobroma cacao]
14 Hb_001345_010 0.1196252014 - - hypothetical protein MIMGU_mgv1a010889mg [Erythranthe guttata]
15 Hb_000753_180 0.1202912244 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
16 Hb_000471_010 0.1217897402 - - ATP binding protein, putative [Ricinus communis]
17 Hb_006916_020 0.126826642 - - Flavonol 4'-sulfotransferase, putative [Ricinus communis]
18 Hb_000017_320 0.1281906673 transcription factor TF Family: bHLH PREDICTED: transcription factor GLABRA 3-like isoform X1 [Jatropha curcas]
19 Hb_004627_020 0.1307167677 - - Protein MLO, putative [Ricinus communis]
20 Hb_000684_490 0.132110165 transcription factor TF Family: WRKY PREDICTED: WRKY transcription factor 44 [Jatropha curcas]

Gene co-expression network

sample Hb_009150_060 Hb_009150_060 Hb_001300_140 Hb_001300_140 Hb_009150_060--Hb_001300_140 Hb_004010_090 Hb_004010_090 Hb_009150_060--Hb_004010_090 Hb_000836_260 Hb_000836_260 Hb_009150_060--Hb_000836_260 Hb_004128_090 Hb_004128_090 Hb_009150_060--Hb_004128_090 Hb_011440_010 Hb_011440_010 Hb_009150_060--Hb_011440_010 Hb_010839_010 Hb_010839_010 Hb_009150_060--Hb_010839_010 Hb_001300_140--Hb_011440_010 Hb_001300_140--Hb_000836_260 Hb_000753_180 Hb_000753_180 Hb_001300_140--Hb_000753_180 Hb_005333_210 Hb_005333_210 Hb_001300_140--Hb_005333_210 Hb_000844_090 Hb_000844_090 Hb_001300_140--Hb_000844_090 Hb_004010_090--Hb_004128_090 Hb_002475_030 Hb_002475_030 Hb_004010_090--Hb_002475_030 Hb_004010_090--Hb_010839_010 Hb_009812_010 Hb_009812_010 Hb_004010_090--Hb_009812_010 Hb_001514_070 Hb_001514_070 Hb_004010_090--Hb_001514_070 Hb_000847_120 Hb_000847_120 Hb_000836_260--Hb_000847_120 Hb_004943_010 Hb_004943_010 Hb_000836_260--Hb_004943_010 Hb_008376_020 Hb_008376_020 Hb_000836_260--Hb_008376_020 Hb_000836_260--Hb_000753_180 Hb_004128_090--Hb_002475_030 Hb_004128_090--Hb_010839_010 Hb_003085_080 Hb_003085_080 Hb_004128_090--Hb_003085_080 Hb_004128_090--Hb_009812_010 Hb_123560_020 Hb_123560_020 Hb_011440_010--Hb_123560_020 Hb_005168_030 Hb_005168_030 Hb_011440_010--Hb_005168_030 Hb_011440_010--Hb_000753_180 Hb_001358_120 Hb_001358_120 Hb_011440_010--Hb_001358_120 Hb_010839_010--Hb_009812_010 Hb_029576_080 Hb_029576_080 Hb_010839_010--Hb_029576_080 Hb_000011_120 Hb_000011_120 Hb_010839_010--Hb_000011_120 Hb_005116_010 Hb_005116_010 Hb_010839_010--Hb_005116_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0494878 0.0982139 0.0628465 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.233388 0.0898388

CAGE analysis