Hb_009164_020

Information

Type -
Description -
Location Contig9164: 8019-10196
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa026212mg
description hypothetical protein
nr
ID XP_007204046.1
description hypothetical protein PRUPE_ppa026212mg, partial [Prunus persica]
swissprot
ID -
description -
trembl
ID M5WER1
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa026212mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009164_020 0.0 - - hypothetical protein PRUPE_ppa026212mg, partial [Prunus persica]
2 Hb_000893_030 0.1518630686 - - PREDICTED: uncharacterized protein LOC105851424 [Cicer arietinum]
3 Hb_000172_500 0.1913007588 - - conserved hypothetical protein [Ricinus communis]
4 Hb_003780_040 0.1993594887 - - PREDICTED: putative ribonuclease H protein At1g65750-like [Citrus sinensis]
5 Hb_123304_010 0.2018588024 - - hypothetical protein MIMGU_mgv1a018902mg [Erythranthe guttata]
6 Hb_038601_010 0.2531844454 - - PREDICTED: uncharacterized protein LOC102606280 [Solanum tuberosum]
7 Hb_154114_020 0.2544361504 - - -
8 Hb_000668_120 0.2635401673 - - hypothetical protein JCGZ_11991 [Jatropha curcas]
9 Hb_006570_130 0.2657792471 - - conserved hypothetical protein [Ricinus communis]
10 Hb_002435_070 0.270107018 - - hypothetical protein JCGZ_05738 [Jatropha curcas]
11 Hb_000701_070 0.2813375058 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
12 Hb_007970_030 0.2829861696 - - PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X1 [Jatropha curcas]
13 Hb_182291_020 0.2830131453 - - hypothetical protein CICLE_v10029871mg [Citrus clementina]
14 Hb_000116_340 0.2830804069 - - PREDICTED: small acidic protein 1 [Jatropha curcas]
15 Hb_003767_020 0.2846422063 - - PREDICTED: MLP-like protein 43 [Fragaria vesca subsp. vesca]
16 Hb_028707_060 0.2852895716 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC101308915 [Fragaria vesca subsp. vesca]
17 Hb_000160_340 0.2856942925 transcription factor TF Family: bHLH DNA binding protein, putative [Ricinus communis]
18 Hb_002893_140 0.2881573281 - - Glycine-rich cell wall structural protein precursor, putative [Ricinus communis]
19 Hb_004725_040 0.2908352572 - - -
20 Hb_009554_020 0.2913462832 - - PREDICTED: em-like protein GEA6 [Sesamum indicum]

Gene co-expression network

sample Hb_009164_020 Hb_009164_020 Hb_000893_030 Hb_000893_030 Hb_009164_020--Hb_000893_030 Hb_000172_500 Hb_000172_500 Hb_009164_020--Hb_000172_500 Hb_003780_040 Hb_003780_040 Hb_009164_020--Hb_003780_040 Hb_123304_010 Hb_123304_010 Hb_009164_020--Hb_123304_010 Hb_038601_010 Hb_038601_010 Hb_009164_020--Hb_038601_010 Hb_154114_020 Hb_154114_020 Hb_009164_020--Hb_154114_020 Hb_000893_030--Hb_123304_010 Hb_000893_030--Hb_000172_500 Hb_000701_070 Hb_000701_070 Hb_000893_030--Hb_000701_070 Hb_003767_020 Hb_003767_020 Hb_000893_030--Hb_003767_020 Hb_000116_340 Hb_000116_340 Hb_000893_030--Hb_000116_340 Hb_005015_040 Hb_005015_040 Hb_000172_500--Hb_005015_040 Hb_009554_020 Hb_009554_020 Hb_000172_500--Hb_009554_020 Hb_057597_020 Hb_057597_020 Hb_000172_500--Hb_057597_020 Hb_000019_090 Hb_000019_090 Hb_000172_500--Hb_000019_090 Hb_000340_070 Hb_000340_070 Hb_003780_040--Hb_000340_070 Hb_000604_080 Hb_000604_080 Hb_003780_040--Hb_000604_080 Hb_000574_270 Hb_000574_270 Hb_003780_040--Hb_000574_270 Hb_000170_080 Hb_000170_080 Hb_003780_040--Hb_000170_080 Hb_000668_120 Hb_000668_120 Hb_003780_040--Hb_000668_120 Hb_123304_010--Hb_000701_070 Hb_123304_010--Hb_000172_500 Hb_001032_040 Hb_001032_040 Hb_123304_010--Hb_001032_040 Hb_003658_030 Hb_003658_030 Hb_123304_010--Hb_003658_030 Hb_002435_070 Hb_002435_070 Hb_038601_010--Hb_002435_070 Hb_006570_130 Hb_006570_130 Hb_038601_010--Hb_006570_130 Hb_004725_040 Hb_004725_040 Hb_038601_010--Hb_004725_040 Hb_028707_060 Hb_028707_060 Hb_038601_010--Hb_028707_060 Hb_008764_010 Hb_008764_010 Hb_038601_010--Hb_008764_010 Hb_038601_010--Hb_154114_020 Hb_154114_020--Hb_002435_070 Hb_000122_090 Hb_000122_090 Hb_154114_020--Hb_000122_090 Hb_154114_020--Hb_000340_070 Hb_154114_020--Hb_008764_010 Hb_000025_390 Hb_000025_390 Hb_154114_020--Hb_000025_390
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0841467 0.385493 0 0 0.0591062
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0245697 0

CAGE analysis