Hb_009189_030

Information

Type -
Description -
Location Contig9189: 18720-19364
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa023969mg
description hypothetical protein
nr
ID XP_007199337.1
description hypothetical protein PRUPE_ppa023969mg, partial [Prunus persica]
swissprot
ID -
description -
trembl
ID M5VIG0
description Uncharacterized protein (Fragment) OS=Prunus persica GN=PRUPE_ppa023969mg PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009189_030 0.0 - - hypothetical protein PRUPE_ppa023969mg, partial [Prunus persica]
2 Hb_003222_010 0.1427549299 - - MULTISPECIES: hypothetical protein, partial [Pseudomonas fluorescens group]
3 Hb_027255_010 0.1628322545 transcription factor TF Family: Orphans conserved hypothetical protein [Ricinus communis]
4 Hb_000205_070 0.1670763096 - - kinase, putative [Ricinus communis]
5 Hb_000853_290 0.1871995657 - - PREDICTED: uncharacterized protein LOC105642585 [Jatropha curcas]
6 Hb_004631_160 0.1883836941 transcription factor TF Family: HB PREDICTED: homeobox-leucine zipper protein ATHB-6-like [Jatropha curcas]
7 Hb_003337_070 0.1894861293 - - PREDICTED: probable esterase KAI2 [Jatropha curcas]
8 Hb_006745_020 0.2061381806 - - PREDICTED: 22.0 kDa class IV heat shock protein [Jatropha curcas]
9 Hb_000176_060 0.209861338 - - unnamed protein product [Vitis vinifera]
10 Hb_022452_010 0.2101278119 - - -
11 Hb_001951_120 0.2147063973 - - -
12 Hb_005203_050 0.2149446143 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
13 Hb_003816_020 0.219188436 - - hypothetical protein POPTR_0017s05940g [Populus trichocarpa]
14 Hb_033926_010 0.2207447185 - - -
15 Hb_001276_010 0.2242641488 desease resistance Gene Name: NB-ARC unnamed protein product [Vitis vinifera]
16 Hb_182807_020 0.2289933584 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
17 Hb_004939_020 0.2327263903 - - gag/pol protein [Bryonia dioica]
18 Hb_008053_020 0.2395484755 - - pentatricopeptide repeat-containing protein, putative [Ricinus communis]
19 Hb_184326_010 0.2400760086 - - RecName: Full=Anthocyanidin 3-O-glucosyltransferase 1; AltName: Full=Flavonol 3-O-glucosyltransferase 1; AltName: Full=UDP-glucose flavonoid 3-O-glucosyltransferase 1 [Manihot esculenta]
20 Hb_003398_010 0.2429399765 - - PREDICTED: uncharacterized protein At4g02000-like [Eucalyptus grandis]

Gene co-expression network

sample Hb_009189_030 Hb_009189_030 Hb_003222_010 Hb_003222_010 Hb_009189_030--Hb_003222_010 Hb_027255_010 Hb_027255_010 Hb_009189_030--Hb_027255_010 Hb_000205_070 Hb_000205_070 Hb_009189_030--Hb_000205_070 Hb_000853_290 Hb_000853_290 Hb_009189_030--Hb_000853_290 Hb_004631_160 Hb_004631_160 Hb_009189_030--Hb_004631_160 Hb_003337_070 Hb_003337_070 Hb_009189_030--Hb_003337_070 Hb_001276_010 Hb_001276_010 Hb_003222_010--Hb_001276_010 Hb_001935_190 Hb_001935_190 Hb_003222_010--Hb_001935_190 Hb_003222_010--Hb_004631_160 Hb_120662_010 Hb_120662_010 Hb_003222_010--Hb_120662_010 Hb_001916_060 Hb_001916_060 Hb_003222_010--Hb_001916_060 Hb_027255_010--Hb_000205_070 Hb_009686_010 Hb_009686_010 Hb_027255_010--Hb_009686_010 Hb_114868_010 Hb_114868_010 Hb_027255_010--Hb_114868_010 Hb_002326_060 Hb_002326_060 Hb_027255_010--Hb_002326_060 Hb_027255_010--Hb_000853_290 Hb_000205_070--Hb_003337_070 Hb_000176_060 Hb_000176_060 Hb_000205_070--Hb_000176_060 Hb_022452_010 Hb_022452_010 Hb_000205_070--Hb_022452_010 Hb_006745_020 Hb_006745_020 Hb_000205_070--Hb_006745_020 Hb_000853_290--Hb_006745_020 Hb_000853_300 Hb_000853_300 Hb_000853_290--Hb_000853_300 Hb_182807_020 Hb_182807_020 Hb_000853_290--Hb_182807_020 Hb_025194_030 Hb_025194_030 Hb_000853_290--Hb_025194_030 Hb_007044_010 Hb_007044_010 Hb_000853_290--Hb_007044_010 Hb_008616_030 Hb_008616_030 Hb_004631_160--Hb_008616_030 Hb_003398_010 Hb_003398_010 Hb_004631_160--Hb_003398_010 Hb_000617_040 Hb_000617_040 Hb_004631_160--Hb_000617_040 Hb_004631_160--Hb_007044_010 Hb_011639_010 Hb_011639_010 Hb_004631_160--Hb_011639_010 Hb_004631_160--Hb_000205_070 Hb_003337_070--Hb_006745_020 Hb_003647_120 Hb_003647_120 Hb_003337_070--Hb_003647_120 Hb_001279_230 Hb_001279_230 Hb_003337_070--Hb_001279_230 Hb_184326_010 Hb_184326_010 Hb_003337_070--Hb_184326_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.201789 0.333062 0.0360388 0.0437087 0.638388 0.439135
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis