Hb_009247_020

Information

Type -
Description -
Location Contig9247: 10334-12116
Sequence    

Annotation

kegg
ID pop:POPTR_0019s09630g
description hypothetical protein
nr
ID KDP38828.1
description hypothetical protein JCGZ_04985 [Jatropha curcas]
swissprot
ID Q9SZ67
description Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1
trembl
ID A0A067KV39
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_04985 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009247_020 0.0 - - hypothetical protein JCGZ_04985 [Jatropha curcas]
2 Hb_136027_010 0.1167444966 desease resistance Gene Name: NB-ARC hypothetical protein JCGZ_26658 [Jatropha curcas]
3 Hb_005568_060 0.1184044478 - - PREDICTED: mitogen-activated protein kinase 3 [Jatropha curcas]
4 Hb_009189_010 0.1191650858 transcription factor TF Family: WRKY PREDICTED: probable WRKY transcription factor 33 [Jatropha curcas]
5 Hb_001411_150 0.1235688739 - - Dormancy/auxin associated family protein, putative [Theobroma cacao]
6 Hb_000563_460 0.1243922654 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
7 Hb_016404_010 0.1259613169 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
8 Hb_035391_010 0.126227974 - - TMV resistance protein N, putative [Ricinus communis]
9 Hb_012423_020 0.1273075794 - - hypothetical protein JCGZ_20730 [Jatropha curcas]
10 Hb_073870_020 0.128052627 - - PREDICTED: probable receptor-like protein kinase At1g67000, partial [Jatropha curcas]
11 Hb_002849_030 0.1281267875 transcription factor TF Family: WRKY hypothetical protein POPTR_0014s09190g [Populus trichocarpa]
12 Hb_002311_490 0.1321093919 - - PREDICTED: RING-H2 finger protein ATL2 [Jatropha curcas]
13 Hb_000210_150 0.1333283113 - - PREDICTED: protein YLS9-like [Jatropha curcas]
14 Hb_011287_020 0.1351473861 - - ATP binding protein, putative [Ricinus communis]
15 Hb_000796_200 0.1364025891 - - PREDICTED: probable glycerol-3-phosphate acyltransferase 3 [Jatropha curcas]
16 Hb_000397_090 0.1367652984 - - PREDICTED: uncharacterized protein LOC105641235 [Jatropha curcas]
17 Hb_001846_040 0.1377180697 - - cytochrome P450, putative [Ricinus communis]
18 Hb_000506_140 0.1384506446 - - hypothetical protein PRUPE_ppb019425mg [Prunus persica]
19 Hb_009476_010 0.139933125 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 29 [Jatropha curcas]
20 Hb_007328_010 0.1423320624 - - PREDICTED: putative receptor-like protein kinase At3g47110 [Fragaria vesca subsp. vesca]

Gene co-expression network

sample Hb_009247_020 Hb_009247_020 Hb_136027_010 Hb_136027_010 Hb_009247_020--Hb_136027_010 Hb_005568_060 Hb_005568_060 Hb_009247_020--Hb_005568_060 Hb_009189_010 Hb_009189_010 Hb_009247_020--Hb_009189_010 Hb_001411_150 Hb_001411_150 Hb_009247_020--Hb_001411_150 Hb_000563_460 Hb_000563_460 Hb_009247_020--Hb_000563_460 Hb_016404_010 Hb_016404_010 Hb_009247_020--Hb_016404_010 Hb_003582_020 Hb_003582_020 Hb_136027_010--Hb_003582_020 Hb_136027_010--Hb_016404_010 Hb_035391_010 Hb_035391_010 Hb_136027_010--Hb_035391_010 Hb_001846_040 Hb_001846_040 Hb_136027_010--Hb_001846_040 Hb_000796_200 Hb_000796_200 Hb_136027_010--Hb_000796_200 Hb_181824_010 Hb_181824_010 Hb_005568_060--Hb_181824_010 Hb_005568_060--Hb_001846_040 Hb_004787_100 Hb_004787_100 Hb_005568_060--Hb_004787_100 Hb_005568_060--Hb_016404_010 Hb_006483_050 Hb_006483_050 Hb_005568_060--Hb_006483_050 Hb_009189_010--Hb_001411_150 Hb_073870_020 Hb_073870_020 Hb_009189_010--Hb_073870_020 Hb_007383_050 Hb_007383_050 Hb_009189_010--Hb_007383_050 Hb_002849_030 Hb_002849_030 Hb_009189_010--Hb_002849_030 Hb_000347_360 Hb_000347_360 Hb_009189_010--Hb_000347_360 Hb_001289_030 Hb_001289_030 Hb_009189_010--Hb_001289_030 Hb_001411_150--Hb_007383_050 Hb_001411_150--Hb_001289_030 Hb_004267_070 Hb_004267_070 Hb_001411_150--Hb_004267_070 Hb_001168_100 Hb_001168_100 Hb_001411_150--Hb_001168_100 Hb_089140_020 Hb_089140_020 Hb_001411_150--Hb_089140_020 Hb_002311_490 Hb_002311_490 Hb_000563_460--Hb_002311_490 Hb_000016_220 Hb_000016_220 Hb_000563_460--Hb_000016_220 Hb_011671_290 Hb_011671_290 Hb_000563_460--Hb_011671_290 Hb_000563_460--Hb_073870_020 Hb_000506_140 Hb_000506_140 Hb_000563_460--Hb_000506_140 Hb_016404_010--Hb_000506_140 Hb_016404_010--Hb_000796_200 Hb_016404_010--Hb_002311_490 Hb_000465_330 Hb_000465_330 Hb_016404_010--Hb_000465_330
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.401365 76.7978 11.3501 9.90569 1.38201 1.19137
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.257721 0.247822 0.212227 3.28811 3.35654

CAGE analysis