Hb_009252_110

Information

Type -
Description -
Location Contig9252: 120204-121463
Sequence    

Annotation

kegg
ID csv:101222361
description bidirectional sugar transporter SWEET5-like
nr
ID KDP31116.1
description hypothetical protein JCGZ_11492 [Jatropha curcas]
swissprot
ID Q9FM10
description Bidirectional sugar transporter SWEET5 OS=Arabidopsis thaliana GN=SWEET5 PE=2 SV=2
trembl
ID A0A067K4H0
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11492 PE=4 SV=1
Gene Ontology
ID GO:0005887
description bidirectional sugar transporter sweet5

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009252_110 0.0 - - hypothetical protein JCGZ_11492 [Jatropha curcas]
2 Hb_005888_040 0.0341856135 - - PREDICTED: gibberellin 20 oxidase 2 [Jatropha curcas]
3 Hb_002267_040 0.04107939 - - -
4 Hb_062226_080 0.042088124 - - -
5 Hb_015026_010 0.0762994492 - - -
6 Hb_105446_010 0.0896109299 - - -
7 Hb_066350_010 0.0898822975 - - somatic embryogenesis receptor-like kinase 4, partial [Rosa hybrid cultivar]
8 Hb_000504_050 0.111571093 transcription factor TF Family: LOB LOB domain protein 25 [Populus trichocarpa]
9 Hb_000751_210 0.1143013941 - - PREDICTED: petal death protein isoform X2 [Jatropha curcas]
10 Hb_000658_020 0.126059321 - - PREDICTED: UDP-glucuronate 4-epimerase 1 [Musa acuminata subsp. malaccensis]
11 Hb_000501_090 0.1262133624 - - -
12 Hb_112011_010 0.1302367634 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
13 Hb_132438_010 0.132308493 - - PREDICTED: uncharacterized protein LOC104800023, partial [Tarenaya hassleriana]
14 Hb_012879_010 0.1340649246 - - conserved hypothetical protein [Ricinus communis]
15 Hb_004724_010 0.1353774281 - - -
16 Hb_017866_010 0.1433134951 - - kinase family protein [Populus trichocarpa]
17 Hb_009543_040 0.145680399 - - -
18 Hb_004590_010 0.1494528766 - - hypothetical protein JCGZ_17178 [Jatropha curcas]
19 Hb_161954_010 0.154083473 - - hypothetical protein JCGZ_05404 [Jatropha curcas]
20 Hb_005900_020 0.1555146723 - - -

Gene co-expression network

sample Hb_009252_110 Hb_009252_110 Hb_005888_040 Hb_005888_040 Hb_009252_110--Hb_005888_040 Hb_002267_040 Hb_002267_040 Hb_009252_110--Hb_002267_040 Hb_062226_080 Hb_062226_080 Hb_009252_110--Hb_062226_080 Hb_015026_010 Hb_015026_010 Hb_009252_110--Hb_015026_010 Hb_105446_010 Hb_105446_010 Hb_009252_110--Hb_105446_010 Hb_066350_010 Hb_066350_010 Hb_009252_110--Hb_066350_010 Hb_005888_040--Hb_062226_080 Hb_005888_040--Hb_002267_040 Hb_005888_040--Hb_015026_010 Hb_005888_040--Hb_105446_010 Hb_005888_040--Hb_066350_010 Hb_002267_040--Hb_062226_080 Hb_002267_040--Hb_015026_010 Hb_002267_040--Hb_066350_010 Hb_000501_090 Hb_000501_090 Hb_002267_040--Hb_000501_090 Hb_062226_080--Hb_015026_010 Hb_062226_080--Hb_105446_010 Hb_062226_080--Hb_066350_010 Hb_015026_010--Hb_000501_090 Hb_015026_010--Hb_066350_010 Hb_000751_210 Hb_000751_210 Hb_105446_010--Hb_000751_210 Hb_112011_010 Hb_112011_010 Hb_105446_010--Hb_112011_010 Hb_000658_020 Hb_000658_020 Hb_105446_010--Hb_000658_020 Hb_017866_010 Hb_017866_010 Hb_105446_010--Hb_017866_010 Hb_132438_010 Hb_132438_010 Hb_105446_010--Hb_132438_010 Hb_004724_010 Hb_004724_010 Hb_105446_010--Hb_004724_010 Hb_066350_010--Hb_000501_090
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.068785 0 0.0928752 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0250074 0

CAGE analysis