Hb_009265_080

Information

Type -
Description -
Location Contig9265: 109868-117984
Sequence    

Annotation

kegg
ID cic:CICLE_v10014801mg
description hypothetical protein
nr
ID XP_012091711.1
description PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]
swissprot
ID Q5R644
description Apoptosis inhibitor 5 OS=Pongo abelii GN=API5 PE=2 SV=1
trembl
ID A0A067JM14
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_21516 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_62716: 110702-113646 , PASA_asmbl_62717: 113002-113256
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009265_080 0.0 - - PREDICTED: apoptosis inhibitor 5 [Jatropha curcas]
2 Hb_002007_350 0.0533887531 - - PREDICTED: mitochondrial Rho GTPase 1-like [Jatropha curcas]
3 Hb_008253_010 0.0550647719 - - PREDICTED: uncharacterized protein LOC105633240 [Jatropha curcas]
4 Hb_004678_060 0.0551469786 transcription factor TF Family: FAR1 PREDICTED: protein FAR1-RELATED SEQUENCE 5 [Jatropha curcas]
5 Hb_002400_180 0.0606672759 - - conserved hypothetical protein [Ricinus communis]
6 Hb_000803_300 0.0626709993 - - nuclear movement protein nudc, putative [Ricinus communis]
7 Hb_004195_280 0.0628431338 - - PREDICTED: CDK5RAP1-like protein [Jatropha curcas]
8 Hb_000034_050 0.0640588774 - - PREDICTED: uncharacterized protein LOC105637912 [Jatropha curcas]
9 Hb_000481_040 0.0653576634 - - developmentally regulated GTP-binding protein, putative [Ricinus communis]
10 Hb_000789_080 0.0690896954 - - PREDICTED: arginine--tRNA ligase, cytoplasmic-like isoform X1 [Jatropha curcas]
11 Hb_031939_010 0.0702116035 - - Coiled-coil domain-containing protein, putative [Ricinus communis]
12 Hb_007590_080 0.0708223406 - - PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Malus domestica]
13 Hb_010423_020 0.0710225031 - - PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Jatropha curcas]
14 Hb_003006_060 0.0716542277 - - PREDICTED: pre-mRNA-splicing factor syf2 [Jatropha curcas]
15 Hb_003581_120 0.0719191406 - - PREDICTED: uncharacterized protein LOC105649777 [Jatropha curcas]
16 Hb_000322_100 0.0724565519 - - PREDICTED: casein kinase I isoform delta-like [Jatropha curcas]
17 Hb_011942_080 0.0727103836 - - PREDICTED: ubiquitin receptor RAD23b-like [Gossypium raimondii]
18 Hb_010931_080 0.073311438 - - PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2-like [Jatropha curcas]
19 Hb_004096_030 0.074691517 - - PREDICTED: KH domain-containing protein At4g18375-like isoform X1 [Jatropha curcas]
20 Hb_008695_120 0.0749216724 transcription factor TF Family: C2H2 PREDICTED: MYST-like histone acetyltransferase 2 [Jatropha curcas]

Gene co-expression network

sample Hb_009265_080 Hb_009265_080 Hb_002007_350 Hb_002007_350 Hb_009265_080--Hb_002007_350 Hb_008253_010 Hb_008253_010 Hb_009265_080--Hb_008253_010 Hb_004678_060 Hb_004678_060 Hb_009265_080--Hb_004678_060 Hb_002400_180 Hb_002400_180 Hb_009265_080--Hb_002400_180 Hb_000803_300 Hb_000803_300 Hb_009265_080--Hb_000803_300 Hb_004195_280 Hb_004195_280 Hb_009265_080--Hb_004195_280 Hb_002007_350--Hb_008253_010 Hb_002007_350--Hb_004678_060 Hb_007590_080 Hb_007590_080 Hb_002007_350--Hb_007590_080 Hb_002007_350--Hb_000803_300 Hb_003656_160 Hb_003656_160 Hb_002007_350--Hb_003656_160 Hb_008253_010--Hb_004678_060 Hb_007336_020 Hb_007336_020 Hb_008253_010--Hb_007336_020 Hb_008253_010--Hb_007590_080 Hb_134364_010 Hb_134364_010 Hb_008253_010--Hb_134364_010 Hb_004678_060--Hb_002400_180 Hb_004678_060--Hb_003656_160 Hb_003006_060 Hb_003006_060 Hb_004678_060--Hb_003006_060 Hb_003581_120 Hb_003581_120 Hb_002400_180--Hb_003581_120 Hb_000684_420 Hb_000684_420 Hb_002400_180--Hb_000684_420 Hb_002400_180--Hb_000803_300 Hb_002097_090 Hb_002097_090 Hb_002400_180--Hb_002097_090 Hb_000034_050 Hb_000034_050 Hb_002400_180--Hb_000034_050 Hb_000803_300--Hb_002097_090 Hb_000522_090 Hb_000522_090 Hb_000803_300--Hb_000522_090 Hb_005245_130 Hb_005245_130 Hb_000803_300--Hb_005245_130 Hb_000139_250 Hb_000139_250 Hb_000803_300--Hb_000139_250 Hb_002174_060 Hb_002174_060 Hb_004195_280--Hb_002174_060 Hb_010423_020 Hb_010423_020 Hb_004195_280--Hb_010423_020 Hb_171900_100 Hb_171900_100 Hb_004195_280--Hb_171900_100 Hb_004195_280--Hb_003006_060 Hb_000179_020 Hb_000179_020 Hb_004195_280--Hb_000179_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
50.6597 19.4391 19.1387 13.425 45.1149 55.8133
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
33.9682 20.3224 24.2439 17.6925 15.0335

CAGE analysis