Hb_009355_010

Information

Type -
Description -
Location Contig9355: 4816-10415
Sequence    

Annotation

kegg
ID egr:104435019
description putative wall-associated receptor kinase-like 16
nr
ID XP_010273252.1
description PREDICTED: putative wall-associated receptor kinase-like 16 [Nelumbo nucifera]
swissprot
ID Q9LMN7
description Wall-associated receptor kinase 5 OS=Arabidopsis thaliana GN=WAK5 PE=2 SV=1
trembl
ID F6GSN9
description Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g02100 PE=4 SV=1
Gene Ontology
ID GO:0004672
description wall-associated receptor kinase-like 16

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009355_010 0.0 - - PREDICTED: putative wall-associated receptor kinase-like 16 [Nelumbo nucifera]
2 Hb_027917_010 0.1086433608 - - PREDICTED: uncharacterized protein LOC103699089, partial [Phoenix dactylifera]
3 Hb_004052_130 0.1134200455 - - PREDICTED: cytochrome P450 78A5 [Jatropha curcas]
4 Hb_004445_030 0.1384367952 - - conserved hypothetical protein [Ricinus communis]
5 Hb_004375_020 0.1412061661 - - hypothetical protein VITISV_034560 [Vitis vinifera]
6 Hb_000373_140 0.1462918865 - - PREDICTED: uncharacterized protein LOC105160092 [Sesamum indicum]
7 Hb_004987_040 0.1538322324 - - PREDICTED: uncharacterized protein LOC105800880, partial [Gossypium raimondii]
8 Hb_079902_010 0.1559950367 - - cytochrome c biogenesis B (mitochondrion) [Hevea brasiliensis]
9 Hb_000405_010 0.1650742887 - - hypothetical protein JCGZ_15779 [Jatropha curcas]
10 Hb_000540_180 0.1657039017 - - PREDICTED: probable receptor protein kinase TMK1 [Jatropha curcas]
11 Hb_025628_010 0.1657108974 - - PREDICTED: uncharacterized protein LOC104233990 [Nicotiana sylvestris]
12 Hb_002553_030 0.1674834775 - - hypothetical protein POPTR_0008s16550g [Populus trichocarpa]
13 Hb_006663_080 0.1674957615 - - PREDICTED: uncharacterized protein LOC104107451 [Nicotiana tomentosiformis]
14 Hb_054127_020 0.1676247166 - - TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
15 Hb_020154_010 0.1693100098 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC104235718, partial [Nicotiana sylvestris]
16 Hb_042463_030 0.1697761859 - - unknown [Lotus japonicus]
17 Hb_003625_030 0.1710538552 - - retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa Japonica Group]
18 Hb_101462_010 0.1712113514 - - PREDICTED: probable receptor-like protein kinase At5g39030 isoform X2 [Jatropha curcas]
19 Hb_004683_030 0.1712357684 - - PREDICTED: uncharacterized protein LOC105778947 [Gossypium raimondii]
20 Hb_000629_090 0.1716519557 - - hypothetical protein JCGZ_09480 [Jatropha curcas]

Gene co-expression network

sample Hb_009355_010 Hb_009355_010 Hb_027917_010 Hb_027917_010 Hb_009355_010--Hb_027917_010 Hb_004052_130 Hb_004052_130 Hb_009355_010--Hb_004052_130 Hb_004445_030 Hb_004445_030 Hb_009355_010--Hb_004445_030 Hb_004375_020 Hb_004375_020 Hb_009355_010--Hb_004375_020 Hb_000373_140 Hb_000373_140 Hb_009355_010--Hb_000373_140 Hb_004987_040 Hb_004987_040 Hb_009355_010--Hb_004987_040 Hb_139605_010 Hb_139605_010 Hb_027917_010--Hb_139605_010 Hb_000405_010 Hb_000405_010 Hb_027917_010--Hb_000405_010 Hb_032733_030 Hb_032733_030 Hb_027917_010--Hb_032733_030 Hb_011931_090 Hb_011931_090 Hb_027917_010--Hb_011931_090 Hb_054127_020 Hb_054127_020 Hb_027917_010--Hb_054127_020 Hb_004052_130--Hb_004445_030 Hb_000311_130 Hb_000311_130 Hb_004052_130--Hb_000311_130 Hb_010623_010 Hb_010623_010 Hb_004052_130--Hb_010623_010 Hb_000710_100 Hb_000710_100 Hb_004052_130--Hb_000710_100 Hb_002260_210 Hb_002260_210 Hb_004052_130--Hb_002260_210 Hb_004445_030--Hb_054127_020 Hb_047923_030 Hb_047923_030 Hb_004445_030--Hb_047923_030 Hb_002576_010 Hb_002576_010 Hb_004445_030--Hb_002576_010 Hb_144838_010 Hb_144838_010 Hb_004445_030--Hb_144838_010 Hb_004375_020--Hb_004987_040 Hb_004375_020--Hb_000373_140 Hb_004208_040 Hb_004208_040 Hb_004375_020--Hb_004208_040 Hb_101462_010 Hb_101462_010 Hb_004375_020--Hb_101462_010 Hb_000123_070 Hb_000123_070 Hb_004375_020--Hb_000123_070 Hb_010053_060 Hb_010053_060 Hb_004375_020--Hb_010053_060 Hb_000373_140--Hb_101462_010 Hb_000373_140--Hb_004208_040 Hb_079902_010 Hb_079902_010 Hb_000373_140--Hb_079902_010 Hb_000373_140--Hb_004987_040 Hb_000373_140--Hb_000123_070 Hb_004987_040--Hb_004208_040 Hb_006040_020 Hb_006040_020 Hb_004987_040--Hb_006040_020 Hb_004987_040--Hb_010053_060 Hb_131816_010 Hb_131816_010 Hb_004987_040--Hb_131816_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.100266 0.0128735 0 0.0323264 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0372224 1.34854

CAGE analysis