Hb_009421_090

Information

Type -
Description -
Location Contig9421: 87049-87710
Sequence    

Annotation

kegg
ID pop:POPTR_0007s11160g
description POPTRDRAFT_719300; hypothetical protein
nr
ID XP_012079218.1
description PREDICTED: uncharacterized protein LOC105639694 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067KA93
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_12379 PE=4 SV=1
Gene Ontology
ID GO:0016301
description membrane-associated kinase regulator 1 -like protein

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63213: 87219-87849
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009421_090 0.0 - - PREDICTED: uncharacterized protein LOC105639694 [Jatropha curcas]
2 Hb_014700_020 0.0654632272 - - tryptophan synthase beta chain, putative [Ricinus communis]
3 Hb_000856_230 0.0835675306 - - PREDICTED: LRR receptor-like serine/threonine-protein kinase FEI 2 [Jatropha curcas]
4 Hb_000200_270 0.105453634 - - PREDICTED: lipid phosphate phosphatase 1-like isoform X1 [Jatropha curcas]
5 Hb_115962_010 0.1100327805 - - receptor serine/threonine kinase, putative [Ricinus communis]
6 Hb_003767_030 0.1125516717 - - PREDICTED: probable calcium-binding protein CML23 [Jatropha curcas]
7 Hb_003207_210 0.114118766 - - PREDICTED: uncharacterized protein LOC105645885 [Jatropha curcas]
8 Hb_005695_070 0.1176250934 - - Cysteine-rich RLK 29 [Theobroma cacao]
9 Hb_004316_020 0.1177335207 - - PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Jatropha curcas]
10 Hb_164337_010 0.1216967305 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
11 Hb_010267_020 0.1234429821 - - diphosphoinositol polyphosphate phosphohydrolase, putative [Ricinus communis]
12 Hb_000392_170 0.1239843381 - - PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3 [Jatropha curcas]
13 Hb_001913_070 0.1294571967 - - PREDICTED: caffeoylshikimate esterase-like [Jatropha curcas]
14 Hb_000438_200 0.1298966965 - - PREDICTED: protein NRT1/ PTR FAMILY 5.1 [Jatropha curcas]
15 Hb_000059_030 0.1300267676 - - PREDICTED: chaperone protein dnaJ 10 [Jatropha curcas]
16 Hb_000251_170 0.1323098733 - - leucine-rich repeat transmembrane protein kinase, putative [Ricinus communis]
17 Hb_007919_070 0.1362115473 - - hypothetical protein POPTR_0005s28110g [Populus trichocarpa]
18 Hb_028187_010 0.1363793813 - - hypothetical protein JCGZ_23781 [Jatropha curcas]
19 Hb_000349_170 0.1376658863 - - PREDICTED: geraniol 8-hydroxylase-like [Jatropha curcas]
20 Hb_000371_030 0.1385694562 - - PREDICTED: LOW QUALITY PROTEIN: anthocyanidin 3-O-glucosyltransferase 5 [Prunus mume]

Gene co-expression network

sample Hb_009421_090 Hb_009421_090 Hb_014700_020 Hb_014700_020 Hb_009421_090--Hb_014700_020 Hb_000856_230 Hb_000856_230 Hb_009421_090--Hb_000856_230 Hb_000200_270 Hb_000200_270 Hb_009421_090--Hb_000200_270 Hb_115962_010 Hb_115962_010 Hb_009421_090--Hb_115962_010 Hb_003767_030 Hb_003767_030 Hb_009421_090--Hb_003767_030 Hb_003207_210 Hb_003207_210 Hb_009421_090--Hb_003207_210 Hb_000251_170 Hb_000251_170 Hb_014700_020--Hb_000251_170 Hb_014700_020--Hb_000856_230 Hb_007919_070 Hb_007919_070 Hb_014700_020--Hb_007919_070 Hb_014700_020--Hb_115962_010 Hb_000371_030 Hb_000371_030 Hb_014700_020--Hb_000371_030 Hb_000856_230--Hb_000200_270 Hb_002540_100 Hb_002540_100 Hb_000856_230--Hb_002540_100 Hb_004316_020 Hb_004316_020 Hb_000856_230--Hb_004316_020 Hb_000856_230--Hb_000371_030 Hb_010267_020 Hb_010267_020 Hb_000200_270--Hb_010267_020 Hb_002918_220 Hb_002918_220 Hb_000200_270--Hb_002918_220 Hb_005695_070 Hb_005695_070 Hb_000200_270--Hb_005695_070 Hb_002311_500 Hb_002311_500 Hb_000200_270--Hb_002311_500 Hb_000438_200 Hb_000438_200 Hb_115962_010--Hb_000438_200 Hb_000049_030 Hb_000049_030 Hb_115962_010--Hb_000049_030 Hb_000035_140 Hb_000035_140 Hb_115962_010--Hb_000035_140 Hb_012496_020 Hb_012496_020 Hb_115962_010--Hb_012496_020 Hb_001025_140 Hb_001025_140 Hb_115962_010--Hb_001025_140 Hb_000388_040 Hb_000388_040 Hb_003767_030--Hb_000388_040 Hb_000349_170 Hb_000349_170 Hb_003767_030--Hb_000349_170 Hb_000283_090 Hb_000283_090 Hb_003767_030--Hb_000283_090 Hb_003767_030--Hb_010267_020 Hb_000809_220 Hb_000809_220 Hb_003767_030--Hb_000809_220 Hb_164337_010 Hb_164337_010 Hb_003207_210--Hb_164337_010 Hb_005694_170 Hb_005694_170 Hb_003207_210--Hb_005694_170 Hb_003376_110 Hb_003376_110 Hb_003207_210--Hb_003376_110 Hb_003207_210--Hb_004316_020 Hb_003207_210--Hb_000371_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.4584 6.4537 1.91306 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.0381442 0.527091

CAGE analysis