Hb_009449_100

Information

Type -
Description -
Location Contig9449: 84093-86710
Sequence    

Annotation

kegg
ID rcu:RCOM_0527650
description nucleoside transporter, putative
nr
ID XP_012085352.1
description PREDICTED: equilibrative nucleotide transporter 1 [Jatropha curcas]
swissprot
ID Q8VXY7
description Equilibrative nucleotide transporter 1 OS=Arabidopsis thaliana GN=ENT1 PE=1 SV=1
trembl
ID A0A067K2T7
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_17728 PE=4 SV=1
Gene Ontology
ID GO:0016021
description equilibrative nucleotide transporter 1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63253: 84098-86610
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009449_100 0.0 - - PREDICTED: equilibrative nucleotide transporter 1 [Jatropha curcas]
2 Hb_054865_050 0.0732755001 - - calcium-dependent protein kinase, putative [Ricinus communis]
3 Hb_001514_240 0.0819590797 - - PREDICTED: aspartic proteinase CDR1 [Jatropha curcas]
4 Hb_005064_070 0.0957216958 - - PREDICTED: uncharacterized protein LOC105648318 [Jatropha curcas]
5 Hb_002259_220 0.0968825921 transcription factor TF Family: C3H PREDICTED: zinc finger CCCH domain-containing protein 66 [Jatropha curcas]
6 Hb_026698_020 0.1006819315 - - PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
7 Hb_000329_790 0.1040268568 - - PREDICTED: uncharacterized protein LOC105643367 [Jatropha curcas]
8 Hb_132840_020 0.1124891228 - - PREDICTED: protein LHY [Jatropha curcas]
9 Hb_004052_110 0.1168992161 - - PREDICTED: host cell factor 2 isoform X1 [Jatropha curcas]
10 Hb_000375_060 0.1182357872 transcription factor TF Family: C2H2 PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Jatropha curcas]
11 Hb_048476_040 0.1221727266 - - PREDICTED: uncharacterized protein LOC104611656 [Nelumbo nucifera]
12 Hb_005305_120 0.1245774224 - - PREDICTED: calcium-dependent protein kinase 8-like [Jatropha curcas]
13 Hb_012762_040 0.124579348 - - big map kinase/bmk, putative [Ricinus communis]
14 Hb_001102_200 0.1262697255 - - PREDICTED: trifunctional UDP-glucose 4,6-dehydratase/UDP-4-keto-6-deoxy-D-glucose 3,5-epimerase/UDP-4-keto-L-rhamnose-reductase RHM1 [Jatropha curcas]
15 Hb_012366_050 0.1265054332 - - PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 [Jatropha curcas]
16 Hb_001124_140 0.1266045159 - - PREDICTED: inactive beta-amylase 9 [Jatropha curcas]
17 Hb_000635_050 0.1281257661 - - PREDICTED: F-box/kelch-repeat protein At1g67480 [Jatropha curcas]
18 Hb_001195_230 0.1284194084 - - PREDICTED: 3-ketoacyl-CoA synthase 4 [Jatropha curcas]
19 Hb_178818_010 0.1284729079 - - CRINKLY4 related 3, putative [Theobroma cacao]
20 Hb_000098_180 0.1292441085 - - PREDICTED: uncharacterized protein LOC105633342 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_009449_100 Hb_009449_100 Hb_054865_050 Hb_054865_050 Hb_009449_100--Hb_054865_050 Hb_001514_240 Hb_001514_240 Hb_009449_100--Hb_001514_240 Hb_005064_070 Hb_005064_070 Hb_009449_100--Hb_005064_070 Hb_002259_220 Hb_002259_220 Hb_009449_100--Hb_002259_220 Hb_026698_020 Hb_026698_020 Hb_009449_100--Hb_026698_020 Hb_000329_790 Hb_000329_790 Hb_009449_100--Hb_000329_790 Hb_054865_050--Hb_005064_070 Hb_002249_170 Hb_002249_170 Hb_054865_050--Hb_002249_170 Hb_000375_060 Hb_000375_060 Hb_054865_050--Hb_000375_060 Hb_054865_050--Hb_001514_240 Hb_000098_180 Hb_000098_180 Hb_054865_050--Hb_000098_180 Hb_001514_240--Hb_026698_020 Hb_001514_240--Hb_002259_220 Hb_001499_070 Hb_001499_070 Hb_001514_240--Hb_001499_070 Hb_013968_010 Hb_013968_010 Hb_001514_240--Hb_013968_010 Hb_187005_010 Hb_187005_010 Hb_001514_240--Hb_187005_010 Hb_048476_040 Hb_048476_040 Hb_005064_070--Hb_048476_040 Hb_003670_030 Hb_003670_030 Hb_005064_070--Hb_003670_030 Hb_005064_070--Hb_000329_790 Hb_005064_070--Hb_000375_060 Hb_004052_110 Hb_004052_110 Hb_002259_220--Hb_004052_110 Hb_011188_010 Hb_011188_010 Hb_002259_220--Hb_011188_010 Hb_009078_020 Hb_009078_020 Hb_002259_220--Hb_009078_020 Hb_001059_060 Hb_001059_060 Hb_002259_220--Hb_001059_060 Hb_000477_070 Hb_000477_070 Hb_002259_220--Hb_000477_070 Hb_000417_410 Hb_000417_410 Hb_026698_020--Hb_000417_410 Hb_002888_040 Hb_002888_040 Hb_026698_020--Hb_002888_040 Hb_001195_230 Hb_001195_230 Hb_026698_020--Hb_001195_230 Hb_132840_030 Hb_132840_030 Hb_026698_020--Hb_132840_030 Hb_000329_790--Hb_048476_040 Hb_132840_020 Hb_132840_020 Hb_000329_790--Hb_132840_020 Hb_001179_010 Hb_001179_010 Hb_000329_790--Hb_001179_010 Hb_000366_050 Hb_000366_050 Hb_000329_790--Hb_000366_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
5.33333 36.6297 43.945 34.1695 1.45715 2.64704
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
4.36633 4.47011 4.72953 16.6716 32.7456

CAGE analysis