Hb_009486_120

Information

Type -
Description -
Location Contig9486: 72027-74249
Sequence    

Annotation

kegg
ID pper:PRUPE_ppa004149mg
description hypothetical protein
nr
ID XP_007220442.1
description hypothetical protein PRUPE_ppa004149mg [Prunus persica]
swissprot
ID Q2QYH7
description Cytochrome P450 714C2 OS=Oryza sativa subsp. japonica GN=CYP714C2 PE=2 SV=1
trembl
ID M5X847
description Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa004149mg PE=3 SV=1
Gene Ontology
ID GO:0005506
description cytochrome p450 714c2-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63354: 73486-74183
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009486_120 0.0 - - hypothetical protein PRUPE_ppa004149mg [Prunus persica]
2 Hb_123560_020 0.1036941416 - - hypothetical protein JCGZ_12464 [Jatropha curcas]
3 Hb_002304_190 0.1055764605 - - PREDICTED: 3'-N-debenzoyl-2'-deoxytaxol N-benzoyltransferase [Jatropha curcas]
4 Hb_000336_280 0.1069574018 - - PREDICTED: uncharacterized protein LOC105632845 [Jatropha curcas]
5 Hb_022092_050 0.1100432259 - - PREDICTED: uncharacterized protein LOC105136214 [Populus euphratica]
6 Hb_001832_110 0.1112988975 - - PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Jatropha curcas]
7 Hb_002685_100 0.1171354467 - - low temperature inducible SLTI66 [Glycine max]
8 Hb_000753_180 0.1234931225 - - PREDICTED: dirigent protein 22-like [Jatropha curcas]
9 Hb_000215_130 0.1317656628 - - PREDICTED: probable pectinesterase 53 [Jatropha curcas]
10 Hb_005168_030 0.1334935722 - - unknown [Zea mays]
11 Hb_000018_120 0.1361298675 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_011440_010 0.1363260132 - - PREDICTED: metalloendoproteinase 1-like [Pyrus x bretschneideri]
13 Hb_001358_120 0.1424154144 transcription factor TF Family: MYB PREDICTED: myb-related protein 308-like [Populus euphratica]
14 Hb_106321_010 0.1456832658 - - PREDICTED: probable glutathione S-transferase [Jatropha curcas]
15 Hb_001226_100 0.147961066 transcription factor TF Family: WRKY WRKY transcription factor, putative [Ricinus communis]
16 Hb_001186_120 0.1484233546 - - PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5 [Jatropha curcas]
17 Hb_001300_140 0.1498013678 - - -
18 Hb_005333_210 0.1498672907 transcription factor TF Family: bHLH PREDICTED: transcription factor bHLH30-like [Jatropha curcas]
19 Hb_009150_060 0.1546351943 - - PREDICTED: cytochrome P450 CYP749A22-like [Prunus mume]
20 Hb_000017_320 0.1550427372 transcription factor TF Family: bHLH PREDICTED: transcription factor GLABRA 3-like isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_009486_120 Hb_009486_120 Hb_123560_020 Hb_123560_020 Hb_009486_120--Hb_123560_020 Hb_002304_190 Hb_002304_190 Hb_009486_120--Hb_002304_190 Hb_000336_280 Hb_000336_280 Hb_009486_120--Hb_000336_280 Hb_022092_050 Hb_022092_050 Hb_009486_120--Hb_022092_050 Hb_001832_110 Hb_001832_110 Hb_009486_120--Hb_001832_110 Hb_002685_100 Hb_002685_100 Hb_009486_120--Hb_002685_100 Hb_005168_030 Hb_005168_030 Hb_123560_020--Hb_005168_030 Hb_106321_010 Hb_106321_010 Hb_123560_020--Hb_106321_010 Hb_011440_010 Hb_011440_010 Hb_123560_020--Hb_011440_010 Hb_123560_020--Hb_000336_280 Hb_001186_120 Hb_001186_120 Hb_123560_020--Hb_001186_120 Hb_002304_190--Hb_002685_100 Hb_002304_190--Hb_001832_110 Hb_033312_050 Hb_033312_050 Hb_002304_190--Hb_033312_050 Hb_002304_190--Hb_000336_280 Hb_000017_320 Hb_000017_320 Hb_002304_190--Hb_000017_320 Hb_000336_280--Hb_001832_110 Hb_000336_280--Hb_002685_100 Hb_001226_100 Hb_001226_100 Hb_000336_280--Hb_001226_100 Hb_005333_210 Hb_005333_210 Hb_000336_280--Hb_005333_210 Hb_000215_130 Hb_000215_130 Hb_000336_280--Hb_000215_130 Hb_022092_050--Hb_002304_190 Hb_000696_250 Hb_000696_250 Hb_022092_050--Hb_000696_250 Hb_001349_020 Hb_001349_020 Hb_022092_050--Hb_001349_020 Hb_000018_120 Hb_000018_120 Hb_022092_050--Hb_000018_120 Hb_022092_050--Hb_001832_110 Hb_001832_110--Hb_002685_100 Hb_001832_110--Hb_001226_100 Hb_001439_040 Hb_001439_040 Hb_001832_110--Hb_001439_040 Hb_001832_110--Hb_000018_120 Hb_002685_100--Hb_000017_320 Hb_001358_120 Hb_001358_120 Hb_002685_100--Hb_001358_120 Hb_002685_100--Hb_005333_210
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.0462481 0.223304 0.0839868 0.011887 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.281099 0.0953936

CAGE analysis