Hb_009510_060

Information

Type -
Description -
Location Contig9510: 43556-48619
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID M0T9J4
description Uncharacterized protein OS=Musa acuminata subsp. malaccensis PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009510_060 0.0 - - -
2 Hb_010926_030 0.0241475053 - - hypothetical protein CISIN_1g037967mg, partial [Citrus sinensis]
3 Hb_000149_090 0.0758461515 - - -
4 Hb_004712_020 0.1132117787 - - hypothetical protein JCGZ_00782 [Jatropha curcas]
5 Hb_012807_140 0.1242483189 transcription factor TF Family: MYB hypothetical protein POPTR_0009s01270g [Populus trichocarpa]
6 Hb_064482_010 0.1275129024 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_002122_040 0.1285171814 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
8 Hb_001105_200 0.1307035505 - - catalytic, putative [Ricinus communis]
9 Hb_000608_450 0.1326054803 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105645015 [Jatropha curcas]
10 Hb_000844_100 0.1370736612 - - hypothetical protein JCGZ_04351 [Jatropha curcas]
11 Hb_121441_010 0.138226242 desease resistance Gene Name: NB-ARC PREDICTED: putative disease resistance protein RGA3 [Jatropha curcas]
12 Hb_009642_010 0.1412389568 - - Disease resistance protein RFL1, putative [Ricinus communis]
13 Hb_008692_020 0.1473811089 - - -
14 Hb_132515_010 0.1559862772 - - phosphoprotein phosphatase, putative [Ricinus communis]
15 Hb_002490_090 0.1607291954 - - PREDICTED: uncharacterized protein LOC105133003 [Populus euphratica]
16 Hb_088916_010 0.1613485408 - - PREDICTED: receptor-like serine/threonine-protein kinase At4g25390 [Jatropha curcas]
17 Hb_000740_130 0.1615722393 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance RPP13-like protein 4 [Jatropha curcas]
18 Hb_008140_060 0.1638782124 - - Cytochrome P450, putative [Theobroma cacao]
19 Hb_000644_040 0.1651672973 desease resistance Gene Name: NB-ARC hypothetical protein VITISV_009157 [Vitis vinifera]
20 Hb_054865_030 0.1685593028 - - -

Gene co-expression network

sample Hb_009510_060 Hb_009510_060 Hb_010926_030 Hb_010926_030 Hb_009510_060--Hb_010926_030 Hb_000149_090 Hb_000149_090 Hb_009510_060--Hb_000149_090 Hb_004712_020 Hb_004712_020 Hb_009510_060--Hb_004712_020 Hb_012807_140 Hb_012807_140 Hb_009510_060--Hb_012807_140 Hb_064482_010 Hb_064482_010 Hb_009510_060--Hb_064482_010 Hb_002122_040 Hb_002122_040 Hb_009510_060--Hb_002122_040 Hb_010926_030--Hb_000149_090 Hb_010926_030--Hb_004712_020 Hb_010926_030--Hb_012807_140 Hb_001105_200 Hb_001105_200 Hb_010926_030--Hb_001105_200 Hb_010926_030--Hb_002122_040 Hb_121441_010 Hb_121441_010 Hb_000149_090--Hb_121441_010 Hb_000644_040 Hb_000644_040 Hb_000149_090--Hb_000644_040 Hb_002566_010 Hb_002566_010 Hb_000149_090--Hb_002566_010 Hb_008692_020 Hb_008692_020 Hb_000149_090--Hb_008692_020 Hb_004712_020--Hb_012807_140 Hb_004712_020--Hb_001105_200 Hb_004712_020--Hb_002122_040 Hb_004712_020--Hb_008692_020 Hb_002870_010 Hb_002870_010 Hb_004712_020--Hb_002870_010 Hb_012807_140--Hb_001105_200 Hb_012807_140--Hb_002870_010 Hb_012807_140--Hb_002122_040 Hb_000487_240 Hb_000487_240 Hb_012807_140--Hb_000487_240 Hb_009642_010 Hb_009642_010 Hb_012807_140--Hb_009642_010 Hb_002997_050 Hb_002997_050 Hb_064482_010--Hb_002997_050 Hb_064482_010--Hb_000644_040 Hb_132515_010 Hb_132515_010 Hb_064482_010--Hb_132515_010 Hb_004713_050 Hb_004713_050 Hb_064482_010--Hb_004713_050 Hb_002555_030 Hb_002555_030 Hb_064482_010--Hb_002555_030 Hb_002122_040--Hb_009642_010 Hb_002122_040--Hb_001105_200 Hb_002122_040--Hb_008692_020 Hb_002122_040--Hb_002870_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.292812 0 0.221579 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0.760989 0.200526

CAGE analysis