Hb_009615_080

Information

Type -
Description -
Location Contig9615: 66288-67882
Sequence    

Annotation

kegg
ID egr:104421189
description lipoyl synthase, chloroplastic
nr
ID KDP40462.1
description hypothetical protein JCGZ_24461 [Jatropha curcas]
swissprot
ID B9RX57
description Lipoyl synthase, chloroplastic OS=Ricinus communis GN=LIP1P PE=3 SV=1
trembl
ID A0A067KWC4
description Lipoyl synthase, chloroplastic OS=Jatropha curcas GN=LIP1P PE=3 SV=1
Gene Ontology
ID GO:0009507
description lipoyl chloroplastic

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009615_080 0.0 - - hypothetical protein JCGZ_24461 [Jatropha curcas]
2 Hb_025311_020 0.218357206 - - PREDICTED: uncharacterized protein LOC105039527 [Elaeis guineensis]
3 Hb_000876_040 0.2276412151 - - PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B-like [Jatropha curcas]
4 Hb_007125_010 0.2491574022 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]
5 Hb_012424_010 0.2514157374 - - PREDICTED: uncharacterized protein LOC105634770 [Jatropha curcas]
6 Hb_187513_010 0.2533043013 - - PREDICTED: uncharacterized protein LOC105761922 [Gossypium raimondii]
7 Hb_002513_050 0.2560192409 - - hypothetical protein F383_14794 [Gossypium arboreum]
8 Hb_001143_260 0.2656321485 - - PREDICTED: metal transporter Nramp5-like [Populus euphratica]
9 Hb_000184_200 0.267265298 - - -
10 Hb_000574_550 0.2714258707 - - PREDICTED: SNF1-related protein kinase regulatory subunit gamma-like PV42a [Jatropha curcas]
11 Hb_003226_290 0.2728725301 - - catalytic, putative [Ricinus communis]
12 Hb_043623_020 0.2733063028 - - hypothetical protein JCGZ_17692 [Jatropha curcas]
13 Hb_001550_050 0.2823643794 - - PREDICTED: J domain-containing protein spf31 [Eucalyptus grandis]
14 Hb_069783_020 0.2861565462 - - PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC105647845 [Jatropha curcas]
15 Hb_000296_060 0.2919525595 - - -
16 Hb_168311_010 0.2940275825 - - -
17 Hb_029866_030 0.2956611645 - - hypothetical protein CICLE_v10006898mg [Citrus clementina]
18 Hb_125847_010 0.2958264338 - - -
19 Hb_000139_440 0.2961275768 - - unnamed protein product [Coffea canephora]
20 Hb_000590_020 0.2976801994 - - hypothetical protein JCGZ_18748 [Jatropha curcas]

Gene co-expression network

sample Hb_009615_080 Hb_009615_080 Hb_025311_020 Hb_025311_020 Hb_009615_080--Hb_025311_020 Hb_000876_040 Hb_000876_040 Hb_009615_080--Hb_000876_040 Hb_007125_010 Hb_007125_010 Hb_009615_080--Hb_007125_010 Hb_012424_010 Hb_012424_010 Hb_009615_080--Hb_012424_010 Hb_187513_010 Hb_187513_010 Hb_009615_080--Hb_187513_010 Hb_002513_050 Hb_002513_050 Hb_009615_080--Hb_002513_050 Hb_025311_020--Hb_012424_010 Hb_000820_060 Hb_000820_060 Hb_025311_020--Hb_000820_060 Hb_001045_110 Hb_001045_110 Hb_025311_020--Hb_001045_110 Hb_000190_240 Hb_000190_240 Hb_025311_020--Hb_000190_240 Hb_000296_060 Hb_000296_060 Hb_025311_020--Hb_000296_060 Hb_000876_040--Hb_002513_050 Hb_168311_010 Hb_168311_010 Hb_000876_040--Hb_168311_010 Hb_125847_010 Hb_125847_010 Hb_000876_040--Hb_125847_010 Hb_001143_260 Hb_001143_260 Hb_000876_040--Hb_001143_260 Hb_000139_440 Hb_000139_440 Hb_000876_040--Hb_000139_440 Hb_000430_010 Hb_000430_010 Hb_000876_040--Hb_000430_010 Hb_006683_010 Hb_006683_010 Hb_007125_010--Hb_006683_010 Hb_092995_020 Hb_092995_020 Hb_007125_010--Hb_092995_020 Hb_127993_010 Hb_127993_010 Hb_007125_010--Hb_127993_010 Hb_054362_010 Hb_054362_010 Hb_007125_010--Hb_054362_010 Hb_169574_010 Hb_169574_010 Hb_007125_010--Hb_169574_010 Hb_003551_030 Hb_003551_030 Hb_012424_010--Hb_003551_030 Hb_069783_020 Hb_069783_020 Hb_012424_010--Hb_069783_020 Hb_012424_010--Hb_000296_060 Hb_001987_010 Hb_001987_010 Hb_012424_010--Hb_001987_010 Hb_012424_010--Hb_187513_010 Hb_000205_340 Hb_000205_340 Hb_012424_010--Hb_000205_340 Hb_187513_010--Hb_069783_020 Hb_187513_010--Hb_000296_060 Hb_000574_550 Hb_000574_550 Hb_187513_010--Hb_000574_550 Hb_002571_090 Hb_002571_090 Hb_187513_010--Hb_002571_090 Hb_187513_010--Hb_003551_030 Hb_000184_200 Hb_000184_200 Hb_002513_050--Hb_000184_200 Hb_004785_010 Hb_004785_010 Hb_002513_050--Hb_004785_010 Hb_000174_190 Hb_000174_190 Hb_002513_050--Hb_000174_190 Hb_076908_010 Hb_076908_010 Hb_002513_050--Hb_076908_010 Hb_083493_050 Hb_083493_050 Hb_002513_050--Hb_083493_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0 0.15967 0.12235 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 1.566 0.534681 0.123997

CAGE analysis