Hb_009615_110

Information

Type -
Description -
Location Contig9615: 81174-95305
Sequence    

Annotation

kegg
ID pop:POPTR_0008s00320g
description hypothetical protein
nr
ID XP_012068542.1
description PREDICTED: PAX3- and PAX7-binding protein 1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L8L5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24458 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63736: 82667-82900 , PASA_asmbl_63737: 83144-94110
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009615_110 0.0 - - PREDICTED: PAX3- and PAX7-binding protein 1 [Jatropha curcas]
2 Hb_000318_140 0.0731581723 - - Kinase superfamily protein isoform 2 [Theobroma cacao]
3 Hb_000320_440 0.0751110054 - - PREDICTED: tRNA wybutosine-synthesizing protein 2/3/4 isoform X1 [Jatropha curcas]
4 Hb_002955_010 0.0807438465 - - PREDICTED: Werner syndrome ATP-dependent helicase homolog [Jatropha curcas]
5 Hb_001009_050 0.0817828936 - - PREDICTED: WD repeat-containing protein 74 isoform X2 [Jatropha curcas]
6 Hb_000270_450 0.0834870034 - - PREDICTED: uncharacterized protein LOC105167687 [Sesamum indicum]
7 Hb_006173_020 0.0836069897 - - PREDICTED: uncharacterized protein At2g39795, mitochondrial-like [Jatropha curcas]
8 Hb_164010_020 0.0861539513 - - PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC1 [Jatropha curcas]
9 Hb_000684_180 0.0888653159 - - PREDICTED: importin subunit alpha-9 isoform X1 [Jatropha curcas]
10 Hb_000212_280 0.0901510618 - - PREDICTED: putative RNA-binding protein Luc7-like 2 [Gossypium raimondii]
11 Hb_000500_290 0.0944369135 - - bromodomain-containing protein, putative [Ricinus communis]
12 Hb_019871_020 0.0951523944 - - PREDICTED: uncharacterized protein LOC105642047 [Jatropha curcas]
13 Hb_000732_020 0.0951596508 - - PREDICTED: universal stress protein A-like protein [Jatropha curcas]
14 Hb_000573_040 0.0957834697 - - hypothetical protein JCGZ_19524 [Jatropha curcas]
15 Hb_001348_140 0.0959243598 - - conserved hypothetical protein [Ricinus communis]
16 Hb_025557_020 0.0969509643 - - PREDICTED: activating signal cointegrator 1 [Jatropha curcas]
17 Hb_005028_010 0.0984979121 - - interferon-induced guanylate-binding protein, putative [Ricinus communis]
18 Hb_018663_020 0.0986209034 - - PREDICTED: nuclear pore complex protein NUP1 isoform X2 [Jatropha curcas]
19 Hb_002025_140 0.0986972894 - - PREDICTED: UBX domain-containing protein 2 isoform X1 [Jatropha curcas]
20 Hb_000282_150 0.099480304 - - PREDICTED: probable beta-1,3-galactosyltransferase 12 [Jatropha curcas]

Gene co-expression network

sample Hb_009615_110 Hb_009615_110 Hb_000318_140 Hb_000318_140 Hb_009615_110--Hb_000318_140 Hb_000320_440 Hb_000320_440 Hb_009615_110--Hb_000320_440 Hb_002955_010 Hb_002955_010 Hb_009615_110--Hb_002955_010 Hb_001009_050 Hb_001009_050 Hb_009615_110--Hb_001009_050 Hb_000270_450 Hb_000270_450 Hb_009615_110--Hb_000270_450 Hb_006173_020 Hb_006173_020 Hb_009615_110--Hb_006173_020 Hb_025557_020 Hb_025557_020 Hb_000318_140--Hb_025557_020 Hb_002820_040 Hb_002820_040 Hb_000318_140--Hb_002820_040 Hb_018663_020 Hb_018663_020 Hb_000318_140--Hb_018663_020 Hb_000631_150 Hb_000631_150 Hb_000318_140--Hb_000631_150 Hb_000035_400 Hb_000035_400 Hb_000318_140--Hb_000035_400 Hb_001776_080 Hb_001776_080 Hb_000320_440--Hb_001776_080 Hb_000088_180 Hb_000088_180 Hb_000320_440--Hb_000088_180 Hb_000172_530 Hb_000172_530 Hb_000320_440--Hb_000172_530 Hb_000260_700 Hb_000260_700 Hb_000320_440--Hb_000260_700 Hb_003777_220 Hb_003777_220 Hb_000320_440--Hb_003777_220 Hb_000256_270 Hb_000256_270 Hb_002955_010--Hb_000256_270 Hb_000732_020 Hb_000732_020 Hb_002955_010--Hb_000732_020 Hb_000372_040 Hb_000372_040 Hb_002955_010--Hb_000372_040 Hb_000684_180 Hb_000684_180 Hb_002955_010--Hb_000684_180 Hb_002986_050 Hb_002986_050 Hb_002955_010--Hb_002986_050 Hb_001009_050--Hb_018663_020 Hb_001009_050--Hb_000270_450 Hb_001623_550 Hb_001623_550 Hb_001009_050--Hb_001623_550 Hb_001975_070 Hb_001975_070 Hb_001009_050--Hb_001975_070 Hb_025048_040 Hb_025048_040 Hb_001009_050--Hb_025048_040 Hb_001140_080 Hb_001140_080 Hb_000270_450--Hb_001140_080 Hb_000270_450--Hb_025048_040 Hb_005016_030 Hb_005016_030 Hb_000270_450--Hb_005016_030 Hb_000270_450--Hb_000320_440 Hb_001016_060 Hb_001016_060 Hb_006173_020--Hb_001016_060 Hb_006173_020--Hb_005016_030 Hb_019871_020 Hb_019871_020 Hb_006173_020--Hb_019871_020 Hb_006173_020--Hb_000320_440 Hb_006173_020--Hb_000270_450
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
21.8803 7.35818 2.38033 1.67358 26.2677 28.2026
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
14.7951 7.22655 5.13086 4.27668 2.22439

CAGE analysis