Hb_009620_110

Information

Type -
Description -
Location Contig9620: 79439-79639
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009620_110 0.0 - - -
2 Hb_009522_010 0.0404801028 - - hypothetical protein POPTR_0006s18790g [Populus trichocarpa]
3 Hb_185726_010 0.0724336904 - - anthocyanidin 3-O-glucosyltransferase [Hevea brasiliensis]
4 Hb_138977_010 0.0898770235 - - unnamed protein product [Vitis vinifera]
5 Hb_020375_010 0.091266562 - - PREDICTED: transcription factor IBH1 [Jatropha curcas]
6 Hb_000749_300 0.0939818149 - - PREDICTED: uncharacterized protein LOC105129180 [Populus euphratica]
7 Hb_004650_120 0.1008175997 - - PREDICTED: auxin transporter-like protein 3 [Jatropha curcas]
8 Hb_147006_010 0.1015516939 - - receptor like protein 35 [Arabidopsis thaliana]
9 Hb_009070_020 0.1037604581 - - PREDICTED: uncharacterized protein LOC102612959 [Citrus sinensis]
10 Hb_002073_270 0.1050177542 desease resistance Gene Name: TIR PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Jatropha curcas]
11 Hb_009023_010 0.1056947462 - - glycosyl hydrolase family 31 family protein [Populus trichocarpa]
12 Hb_000009_280 0.1089665889 - - Calmodulin, putative [Ricinus communis]
13 Hb_007483_090 0.1091109974 - - conserved hypothetical protein [Ricinus communis]
14 Hb_003417_050 0.1098504876 - - ankyrin repeat-containing protein, putative [Ricinus communis]
15 Hb_007185_050 0.110164964 - - hypothetical protein JCGZ_22475 [Jatropha curcas]
16 Hb_002062_010 0.1116994561 - - hypothetical protein JCGZ_02762 [Jatropha curcas]
17 Hb_003032_030 0.1129343041 transcription factor TF Family: G2-like PREDICTED: uncharacterized protein LOC105639296 isoform X1 [Jatropha curcas]
18 Hb_000017_180 0.1133320379 - - hypothetical protein JCGZ_20551 [Jatropha curcas]
19 Hb_000620_040 0.1137113955 transcription factor TF Family: G2-like transcription factor, putative [Ricinus communis]
20 Hb_005711_030 0.1140700599 - - hypothetical protein RCOM_0460020 [Ricinus communis]

Gene co-expression network

sample Hb_009620_110 Hb_009620_110 Hb_009522_010 Hb_009522_010 Hb_009620_110--Hb_009522_010 Hb_185726_010 Hb_185726_010 Hb_009620_110--Hb_185726_010 Hb_138977_010 Hb_138977_010 Hb_009620_110--Hb_138977_010 Hb_020375_010 Hb_020375_010 Hb_009620_110--Hb_020375_010 Hb_000749_300 Hb_000749_300 Hb_009620_110--Hb_000749_300 Hb_004650_120 Hb_004650_120 Hb_009620_110--Hb_004650_120 Hb_009522_010--Hb_020375_010 Hb_002073_270 Hb_002073_270 Hb_009522_010--Hb_002073_270 Hb_009522_010--Hb_185726_010 Hb_009070_020 Hb_009070_020 Hb_009522_010--Hb_009070_020 Hb_147006_010 Hb_147006_010 Hb_009522_010--Hb_147006_010 Hb_185726_010--Hb_000749_300 Hb_001766_130 Hb_001766_130 Hb_185726_010--Hb_001766_130 Hb_000462_010 Hb_000462_010 Hb_185726_010--Hb_000462_010 Hb_001902_040 Hb_001902_040 Hb_185726_010--Hb_001902_040 Hb_000172_270 Hb_000172_270 Hb_138977_010--Hb_000172_270 Hb_001140_290 Hb_001140_290 Hb_138977_010--Hb_001140_290 Hb_002151_070 Hb_002151_070 Hb_138977_010--Hb_002151_070 Hb_010589_010 Hb_010589_010 Hb_138977_010--Hb_010589_010 Hb_002662_070 Hb_002662_070 Hb_138977_010--Hb_002662_070 Hb_002809_180 Hb_002809_180 Hb_138977_010--Hb_002809_180 Hb_000077_250 Hb_000077_250 Hb_020375_010--Hb_000077_250 Hb_000000_050 Hb_000000_050 Hb_020375_010--Hb_000000_050 Hb_000813_070 Hb_000813_070 Hb_020375_010--Hb_000813_070 Hb_004787_120 Hb_004787_120 Hb_020375_010--Hb_004787_120 Hb_000620_040 Hb_000620_040 Hb_020375_010--Hb_000620_040 Hb_000749_300--Hb_001902_040 Hb_002986_030 Hb_002986_030 Hb_000749_300--Hb_002986_030 Hb_000083_210 Hb_000083_210 Hb_000749_300--Hb_000083_210 Hb_000749_300--Hb_000462_010 Hb_015934_090 Hb_015934_090 Hb_000749_300--Hb_015934_090 Hb_000009_280 Hb_000009_280 Hb_004650_120--Hb_000009_280 Hb_001511_220 Hb_001511_220 Hb_004650_120--Hb_001511_220 Hb_000676_230 Hb_000676_230 Hb_004650_120--Hb_000676_230 Hb_004032_290 Hb_004032_290 Hb_004650_120--Hb_004032_290 Hb_001104_060 Hb_001104_060 Hb_004650_120--Hb_001104_060 Hb_007185_050 Hb_007185_050 Hb_004650_120--Hb_007185_050
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 10.9993 30.3011 92.1064 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 65.9448

CAGE analysis