Hb_009641_040

Information

Type -
Description -
Location Contig9641: 70507-72798
Sequence    

Annotation

kegg
ID rcu:RCOM_0407820
description Membralin, putative
nr
ID XP_012071324.1
description PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067L433
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_05011 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009641_040 0.0 - - PREDICTED: uncharacterized protein LOC105633355 [Jatropha curcas]
2 Hb_014967_020 0.0779308819 - - DNA/RNA polymerases superfamily protein [Theobroma cacao]
3 Hb_000258_210 0.1047435757 - - prenyl-dependent CAAX protease, putative [Ricinus communis]
4 Hb_007237_080 0.1119250284 - - amino acid transporter, putative [Ricinus communis]
5 Hb_003894_180 0.1134469278 - - PREDICTED: uncharacterized protein LOC104245193, partial [Nicotiana sylvestris]
6 Hb_004307_070 0.116379028 - - kinase, putative [Ricinus communis]
7 Hb_003633_170 0.1178913436 - - conserved hypothetical protein [Ricinus communis]
8 Hb_005545_110 0.1203843731 - - PREDICTED: protein trichome birefringence-like 33 [Jatropha curcas]
9 Hb_065521_010 0.1208839837 - - PREDICTED: probable metal-nicotianamine transporter YSL5 [Jatropha curcas]
10 Hb_060198_010 0.1282686462 desease resistance Gene Name: NB-ARC PREDICTED: disease resistance protein RGA2-like [Jatropha curcas]
11 Hb_000473_100 0.1313071209 - - PREDICTED: ultraviolet-B receptor UVR8 [Jatropha curcas]
12 Hb_031224_010 0.13188731 - - -
13 Hb_004667_030 0.1321959968 - - hypothetical protein VITISV_034568 [Vitis vinifera]
14 Hb_144449_010 0.132294357 - - Potassium transporter, putative [Ricinus communis]
15 Hb_001269_400 0.132401194 - - cinnamoyl-CoA reductase [Hevea brasiliensis]
16 Hb_001629_050 0.1333477528 - - structural constituent of cell wall, putative [Ricinus communis]
17 Hb_004893_010 0.1348397232 - - PREDICTED: O-acyltransferase WSD1-like [Jatropha curcas]
18 Hb_001141_160 0.1368157042 - - PREDICTED: sugar transport protein 14-like [Jatropha curcas]
19 Hb_004607_160 0.1368514806 - - PREDICTED: uncharacterized protein LOC105134931 [Populus euphratica]
20 Hb_001778_040 0.1383976555 - - hypothetical protein VITISV_021035 [Vitis vinifera]

Gene co-expression network

sample Hb_009641_040 Hb_009641_040 Hb_014967_020 Hb_014967_020 Hb_009641_040--Hb_014967_020 Hb_000258_210 Hb_000258_210 Hb_009641_040--Hb_000258_210 Hb_007237_080 Hb_007237_080 Hb_009641_040--Hb_007237_080 Hb_003894_180 Hb_003894_180 Hb_009641_040--Hb_003894_180 Hb_004307_070 Hb_004307_070 Hb_009641_040--Hb_004307_070 Hb_003633_170 Hb_003633_170 Hb_009641_040--Hb_003633_170 Hb_014967_020--Hb_000258_210 Hb_065521_010 Hb_065521_010 Hb_014967_020--Hb_065521_010 Hb_059000_010 Hb_059000_010 Hb_014967_020--Hb_059000_010 Hb_007875_020 Hb_007875_020 Hb_014967_020--Hb_007875_020 Hb_004607_160 Hb_004607_160 Hb_014967_020--Hb_004607_160 Hb_001109_130 Hb_001109_130 Hb_000258_210--Hb_001109_130 Hb_000258_210--Hb_065521_010 Hb_004943_010 Hb_004943_010 Hb_000258_210--Hb_004943_010 Hb_000258_210--Hb_007875_020 Hb_026144_040 Hb_026144_040 Hb_007237_080--Hb_026144_040 Hb_002370_050 Hb_002370_050 Hb_007237_080--Hb_002370_050 Hb_000162_070 Hb_000162_070 Hb_007237_080--Hb_000162_070 Hb_001269_400 Hb_001269_400 Hb_007237_080--Hb_001269_400 Hb_002811_110 Hb_002811_110 Hb_007237_080--Hb_002811_110 Hb_000571_060 Hb_000571_060 Hb_007237_080--Hb_000571_060 Hb_007370_010 Hb_007370_010 Hb_003894_180--Hb_007370_010 Hb_000152_570 Hb_000152_570 Hb_003894_180--Hb_000152_570 Hb_004466_090 Hb_004466_090 Hb_003894_180--Hb_004466_090 Hb_003894_180--Hb_003633_170 Hb_002284_060 Hb_002284_060 Hb_003894_180--Hb_002284_060 Hb_000103_300 Hb_000103_300 Hb_003894_180--Hb_000103_300 Hb_001143_140 Hb_001143_140 Hb_004307_070--Hb_001143_140 Hb_000347_420 Hb_000347_420 Hb_004307_070--Hb_000347_420 Hb_006355_070 Hb_006355_070 Hb_004307_070--Hb_006355_070 Hb_000095_070 Hb_000095_070 Hb_004307_070--Hb_000095_070 Hb_000994_100 Hb_000994_100 Hb_004307_070--Hb_000994_100 Hb_031224_010 Hb_031224_010 Hb_003633_170--Hb_031224_010 Hb_003633_170--Hb_007370_010 Hb_002566_020 Hb_002566_020 Hb_003633_170--Hb_002566_020 Hb_008304_050 Hb_008304_050 Hb_003633_170--Hb_008304_050 Hb_004893_010 Hb_004893_010 Hb_003633_170--Hb_004893_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 5.37975 4.55894 14.6042 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 8.37346 10.5784

CAGE analysis