Hb_009646_040

Information

Type -
Description -
Location Contig9646: 31553-32797
Sequence    

Annotation

kegg
ID rcu:RCOM_0939540
description serine-threonine protein kinase, plant-type, putative
nr
ID XP_002519152.1
description serine-threonine protein kinase, plant-type, putative [Ricinus communis]
swissprot
ID Q9LVI6
description Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1
trembl
ID B9RZI3
description Serine-threonine protein kinase, plant-type, putative OS=Ricinus communis GN=RCOM_0939540 PE=4 SV=1
Gene Ontology
ID GO:0004672
description serine-threonine protein plant-

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009646_040 0.0 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
2 Hb_000629_120 0.0989617337 - - Polynucleotidyl transferase, ribonuclease H-like superfamily protein [Theobroma cacao]
3 Hb_000161_060 0.102421261 - - PREDICTED: probable magnesium transporter NIPA4 [Jatropha curcas]
4 Hb_000482_020 0.1128103157 - - cell wall invertase [Manihot esculenta]
5 Hb_017110_010 0.1311758968 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At1g55760 [Jatropha curcas]
6 Hb_001700_030 0.1356413605 transcription factor TF Family: ULT PREDICTED: protein ULTRAPETALA 1-like [Jatropha curcas]
7 Hb_092337_010 0.1360566998 - - PREDICTED: actin-depolymerizing factor 2-like [Nelumbo nucifera]
8 Hb_000130_050 0.1384760249 - - 14-3-3 protein, putative [Ricinus communis]
9 Hb_001205_150 0.1384959111 - - Uncharacterized protein TCM_000403 [Theobroma cacao]
10 Hb_050454_010 0.1412936625 - - PREDICTED: uncharacterized protein LOC105630497 [Jatropha curcas]
11 Hb_000521_130 0.1426138141 - - PREDICTED: citrate synthase, mitochondrial [Jatropha curcas]
12 Hb_000692_220 0.1429466259 - - hypothetical protein B456_002G120900 [Gossypium raimondii]
13 Hb_000085_400 0.1431739823 - - Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus communis]
14 Hb_000138_110 0.1439474706 - - PREDICTED: probable protein phosphatase 2C 68 [Jatropha curcas]
15 Hb_007009_010 0.1455893172 transcription factor TF Family: TRAF PREDICTED: BTB/POZ domain-containing protein At3g05675 [Populus euphratica]
16 Hb_044736_010 0.1486839892 - - ubiquitin-protein ligase, putative [Ricinus communis]
17 Hb_000928_020 0.1488275409 - - hypothetical protein CICLE_v10013682mg [Citrus clementina]
18 Hb_000125_100 0.1507962525 transcription factor TF Family: mTERF PREDICTED: uncharacterized protein LOC105635070 [Jatropha curcas]
19 Hb_000125_080 0.1508571879 transcription factor TF Family: mTERF -
20 Hb_001936_010 0.1531485233 - - hypothetical protein Csa_2G348280 [Cucumis sativus]

Gene co-expression network

sample Hb_009646_040 Hb_009646_040 Hb_000629_120 Hb_000629_120 Hb_009646_040--Hb_000629_120 Hb_000161_060 Hb_000161_060 Hb_009646_040--Hb_000161_060 Hb_000482_020 Hb_000482_020 Hb_009646_040--Hb_000482_020 Hb_017110_010 Hb_017110_010 Hb_009646_040--Hb_017110_010 Hb_001700_030 Hb_001700_030 Hb_009646_040--Hb_001700_030 Hb_092337_010 Hb_092337_010 Hb_009646_040--Hb_092337_010 Hb_000629_120--Hb_000161_060 Hb_000138_110 Hb_000138_110 Hb_000629_120--Hb_000138_110 Hb_000125_100 Hb_000125_100 Hb_000629_120--Hb_000125_100 Hb_000629_120--Hb_092337_010 Hb_000567_120 Hb_000567_120 Hb_000629_120--Hb_000567_120 Hb_001205_150 Hb_001205_150 Hb_000629_120--Hb_001205_150 Hb_000161_060--Hb_001205_150 Hb_010174_020 Hb_010174_020 Hb_000161_060--Hb_010174_020 Hb_000692_220 Hb_000692_220 Hb_000161_060--Hb_000692_220 Hb_000985_060 Hb_000985_060 Hb_000161_060--Hb_000985_060 Hb_000161_060--Hb_092337_010 Hb_030827_070 Hb_030827_070 Hb_000482_020--Hb_030827_070 Hb_050454_010 Hb_050454_010 Hb_000482_020--Hb_050454_010 Hb_003571_030 Hb_003571_030 Hb_000482_020--Hb_003571_030 Hb_044736_010 Hb_044736_010 Hb_000482_020--Hb_044736_010 Hb_000483_220 Hb_000483_220 Hb_000482_020--Hb_000483_220 Hb_017110_010--Hb_000629_120 Hb_181288_020 Hb_181288_020 Hb_017110_010--Hb_181288_020 Hb_017110_010--Hb_000161_060 Hb_003032_010 Hb_003032_010 Hb_017110_010--Hb_003032_010 Hb_017110_010--Hb_000138_110 Hb_000479_200 Hb_000479_200 Hb_017110_010--Hb_000479_200 Hb_004705_100 Hb_004705_100 Hb_001700_030--Hb_004705_100 Hb_001700_030--Hb_000692_220 Hb_033594_150 Hb_033594_150 Hb_001700_030--Hb_033594_150 Hb_001105_070 Hb_001105_070 Hb_001700_030--Hb_001105_070 Hb_007926_060 Hb_007926_060 Hb_001700_030--Hb_007926_060 Hb_001700_030--Hb_001205_150 Hb_004738_100 Hb_004738_100 Hb_092337_010--Hb_004738_100 Hb_092337_010--Hb_000692_220 Hb_001936_010 Hb_001936_010 Hb_092337_010--Hb_001936_010 Hb_003108_020 Hb_003108_020 Hb_092337_010--Hb_003108_020 Hb_092337_010--Hb_004705_100 Hb_092337_010--Hb_000125_100
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.837614 0.328377 0.144614 1.50179 0.365707 0.673044
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.766883 0.791668 1.60054 0.393752 0.386818

CAGE analysis