Hb_009659_050

Information

Type -
Description -
Location Contig9659: 26968-32778
Sequence    

Annotation

kegg
ID cit:102629615
description putative hydrolase C777.06c-like
nr
ID XP_012068967.1
description PREDICTED: putative hydrolase C777.06c isoform X2 [Jatropha curcas]
swissprot
ID O74545
description Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1
trembl
ID A0A067L8F4
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_24759 PE=4 SV=1
Gene Ontology
ID GO:0016787
description hydrolase isoform x2

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63894: 27072-32956 , PASA_asmbl_63895: 26900-32956
cDNA
(Sanger)
(ID:Location)		 023_H02.ab1: 32536-32956 , 030_F06.ab1: 31211-32943

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009659_050 0.0 - - PREDICTED: putative hydrolase C777.06c isoform X2 [Jatropha curcas]
2 Hb_002217_110 0.0649275418 - - PREDICTED: craniofacial development protein 1 [Jatropha curcas]
3 Hb_001227_030 0.0726821264 - - PREDICTED: transcription initiation factor TFIID subunit 2 isoform X1 [Jatropha curcas]
4 Hb_004837_180 0.0792503504 transcription factor TF Family: NF-YA PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Jatropha curcas]
5 Hb_000260_680 0.0794173755 - - PREDICTED: serine/threonine-protein phosphatase 4 regulatory subunit 2-A [Jatropha curcas]
6 Hb_000329_590 0.0839039493 - - catalytic, putative [Ricinus communis]
7 Hb_004236_050 0.0839730546 - - PREDICTED: nipped-B-like protein A [Jatropha curcas]
8 Hb_003929_280 0.0869607889 transcription factor TF Family: CAMTA calmodulin-binding transcription activator (camta), plants, putative [Ricinus communis]
9 Hb_079526_030 0.0871511747 - - PREDICTED: uncharacterized protein LOC105638120 [Jatropha curcas]
10 Hb_000010_110 0.0876408139 - - PREDICTED: serine/threonine-protein kinase AFC2 isoform X2 [Jatropha curcas]
11 Hb_000340_400 0.0900917356 - - Histidine-containing phosphotransfer protein, putative [Ricinus communis]
12 Hb_000331_110 0.0911882997 - - Conserved oligomeric Golgi complex component, putative [Ricinus communis]
13 Hb_000563_230 0.0921259914 - - phospholipase d zeta, putative [Ricinus communis]
14 Hb_000649_070 0.0935727712 - - PREDICTED: probable UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 [Jatropha curcas]
15 Hb_003142_030 0.0946366144 - - PREDICTED: probable plastid-lipid-associated protein 14, chloroplastic [Jatropha curcas]
16 Hb_142368_010 0.0966958821 - - mRNA (guanine-7-)methyltransferase, putative [Ricinus communis]
17 Hb_007590_020 0.0970040723 - - PREDICTED: protein DAMAGED DNA-BINDING 2 [Jatropha curcas]
18 Hb_005779_010 0.0975305641 - - catalytic, putative [Ricinus communis]
19 Hb_012384_030 0.0975932717 - - PREDICTED: ubiquitin carboxyl-terminal hydrolase isozyme L5-like [Jatropha curcas]
20 Hb_000416_110 0.0983267253 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X2 [Jatropha curcas]

Gene co-expression network

sample Hb_009659_050 Hb_009659_050 Hb_002217_110 Hb_002217_110 Hb_009659_050--Hb_002217_110 Hb_001227_030 Hb_001227_030 Hb_009659_050--Hb_001227_030 Hb_004837_180 Hb_004837_180 Hb_009659_050--Hb_004837_180 Hb_000260_680 Hb_000260_680 Hb_009659_050--Hb_000260_680 Hb_000329_590 Hb_000329_590 Hb_009659_050--Hb_000329_590 Hb_004236_050 Hb_004236_050 Hb_009659_050--Hb_004236_050 Hb_002217_110--Hb_004837_180 Hb_002217_110--Hb_000260_680 Hb_001456_060 Hb_001456_060 Hb_002217_110--Hb_001456_060 Hb_012384_030 Hb_012384_030 Hb_002217_110--Hb_012384_030 Hb_003929_280 Hb_003929_280 Hb_002217_110--Hb_003929_280 Hb_001776_060 Hb_001776_060 Hb_002217_110--Hb_001776_060 Hb_005489_020 Hb_005489_020 Hb_001227_030--Hb_005489_020 Hb_000025_410 Hb_000025_410 Hb_001227_030--Hb_000025_410 Hb_002890_290 Hb_002890_290 Hb_001227_030--Hb_002890_290 Hb_005779_080 Hb_005779_080 Hb_001227_030--Hb_005779_080 Hb_152175_010 Hb_152175_010 Hb_001227_030--Hb_152175_010 Hb_001227_030--Hb_004837_180 Hb_005867_070 Hb_005867_070 Hb_004837_180--Hb_005867_070 Hb_007590_020 Hb_007590_020 Hb_004837_180--Hb_007590_020 Hb_004837_180--Hb_003929_280 Hb_001225_040 Hb_001225_040 Hb_004837_180--Hb_001225_040 Hb_004837_180--Hb_004236_050 Hb_000260_680--Hb_001776_060 Hb_000331_110 Hb_000331_110 Hb_000260_680--Hb_000331_110 Hb_079526_030 Hb_079526_030 Hb_000260_680--Hb_079526_030 Hb_001153_210 Hb_001153_210 Hb_000260_680--Hb_001153_210 Hb_005779_010 Hb_005779_010 Hb_000260_680--Hb_005779_010 Hb_002067_030 Hb_002067_030 Hb_000329_590--Hb_002067_030 Hb_005389_100 Hb_005389_100 Hb_000329_590--Hb_005389_100 Hb_154580_010 Hb_154580_010 Hb_000329_590--Hb_154580_010 Hb_000329_590--Hb_000260_680 Hb_005355_030 Hb_005355_030 Hb_000329_590--Hb_005355_030 Hb_004236_050--Hb_003929_280 Hb_000645_170 Hb_000645_170 Hb_004236_050--Hb_000645_170 Hb_003927_040 Hb_003927_040 Hb_004236_050--Hb_003927_040 Hb_004236_050--Hb_007590_020 Hb_012305_030 Hb_012305_030 Hb_004236_050--Hb_012305_030
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
8.57588 8.55178 9.35032 4.03425 6.8585 7.06223
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
6.60194 9.78113 2.91958 5.27916 6.60377

CAGE analysis