Hb_009683_050

Information

Type -
Description -
Location Contig9683: 47279-59837
Sequence    

Annotation

kegg
ID rcu:RCOM_0725620
description wall-associated kinase, putative (EC:2.7.10.2)
nr
ID XP_002524904.1
description wall-associated kinase, putative [Ricinus communis]
swissprot
ID P0C5E2
description Probable serine/threonine-protein kinase At1g18390 OS=Arabidopsis thaliana GN=At1g18390 PE=2 SV=2
trembl
ID B9SFY5
description Wall-associated kinase, putative OS=Ricinus communis GN=RCOM_0725620 PE=3 SV=1
Gene Ontology
ID GO:0005886
description probable serine threonine-protein kinase at1g18390 isoform x1

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009683_050 0.0 - - wall-associated kinase, putative [Ricinus communis]
2 Hb_000086_610 0.1469796587 - - PREDICTED: classical arabinogalactan protein 1-like [Populus euphratica]
3 Hb_006538_030 0.1687561781 - - PREDICTED: uncharacterized protein LOC105642039 [Jatropha curcas]
4 Hb_019654_010 0.1795884041 - - multicopper oxidase, putative [Ricinus communis]
5 Hb_133845_010 0.1806272334 transcription factor TF Family: NAC transcription factor, putative [Ricinus communis]
6 Hb_002660_090 0.1842265862 - - hypothetical protein JCGZ_16500 [Jatropha curcas]
7 Hb_000322_120 0.1864040785 - - PREDICTED: uncharacterized protein LOC105637900 [Jatropha curcas]
8 Hb_018043_010 0.192747122 - - PREDICTED: auxin-induced protein 15A-like [Jatropha curcas]
9 Hb_001268_060 0.1958286812 - - conserved hypothetical protein [Ricinus communis]
10 Hb_001846_040 0.1982985884 - - cytochrome P450, putative [Ricinus communis]
11 Hb_006043_020 0.1985798874 - - PREDICTED: GEM-like protein 5 [Jatropha curcas]
12 Hb_000133_060 0.2023016711 - - PREDICTED: protein YLS9-like [Jatropha curcas]
13 Hb_000523_120 0.2025549748 - - PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Jatropha curcas]
14 Hb_009083_010 0.2040941689 - - Phytosulfokines 3 precursor family protein [Populus trichocarpa]
15 Hb_011287_020 0.2062491521 - - ATP binding protein, putative [Ricinus communis]
16 Hb_002835_260 0.2105431423 - - PREDICTED: uncharacterized protein LOC105640313 [Jatropha curcas]
17 Hb_031530_010 0.2135787931 - - DWNN domain isoform 2 [Theobroma cacao]
18 Hb_022137_020 0.2136265065 transcription factor TF Family: AP2 PREDICTED: dehydration-responsive element-binding protein 1B-like [Jatropha curcas]
19 Hb_019961_010 0.2149638161 - - hypothetical protein POPTR_0017s11350g [Populus trichocarpa]
20 Hb_022206_030 0.2149871186 - - Auxin-induced in root cultures protein 12 precursor, putative [Ricinus communis]

Gene co-expression network

sample Hb_009683_050 Hb_009683_050 Hb_000086_610 Hb_000086_610 Hb_009683_050--Hb_000086_610 Hb_006538_030 Hb_006538_030 Hb_009683_050--Hb_006538_030 Hb_019654_010 Hb_019654_010 Hb_009683_050--Hb_019654_010 Hb_133845_010 Hb_133845_010 Hb_009683_050--Hb_133845_010 Hb_002660_090 Hb_002660_090 Hb_009683_050--Hb_002660_090 Hb_000322_120 Hb_000322_120 Hb_009683_050--Hb_000322_120 Hb_001846_040 Hb_001846_040 Hb_000086_610--Hb_001846_040 Hb_000086_610--Hb_006538_030 Hb_000086_610--Hb_019654_010 Hb_000086_610--Hb_000322_120 Hb_011287_020 Hb_011287_020 Hb_000086_610--Hb_011287_020 Hb_000532_030 Hb_000532_030 Hb_006538_030--Hb_000532_030 Hb_000345_500 Hb_000345_500 Hb_006538_030--Hb_000345_500 Hb_000836_160 Hb_000836_160 Hb_006538_030--Hb_000836_160 Hb_006043_020 Hb_006043_020 Hb_006538_030--Hb_006043_020 Hb_004787_100 Hb_004787_100 Hb_006538_030--Hb_004787_100 Hb_019654_010--Hb_001846_040 Hb_019654_010--Hb_011287_020 Hb_001477_080 Hb_001477_080 Hb_019654_010--Hb_001477_080 Hb_003582_020 Hb_003582_020 Hb_019654_010--Hb_003582_020 Hb_001289_030 Hb_001289_030 Hb_019654_010--Hb_001289_030 Hb_002922_010 Hb_002922_010 Hb_019654_010--Hb_002922_010 Hb_018043_010 Hb_018043_010 Hb_133845_010--Hb_018043_010 Hb_000110_330 Hb_000110_330 Hb_133845_010--Hb_000110_330 Hb_007407_010 Hb_007407_010 Hb_133845_010--Hb_007407_010 Hb_012404_050 Hb_012404_050 Hb_133845_010--Hb_012404_050 Hb_000133_060 Hb_000133_060 Hb_133845_010--Hb_000133_060 Hb_041145_010 Hb_041145_010 Hb_133845_010--Hb_041145_010 Hb_002660_090--Hb_001289_030 Hb_002660_090--Hb_000322_120 Hb_035391_010 Hb_035391_010 Hb_002660_090--Hb_035391_010 Hb_025477_020 Hb_025477_020 Hb_002660_090--Hb_025477_020 Hb_002205_260 Hb_002205_260 Hb_002660_090--Hb_002205_260 Hb_117602_010 Hb_117602_010 Hb_002660_090--Hb_117602_010 Hb_005882_020 Hb_005882_020 Hb_000322_120--Hb_005882_020 Hb_002284_020 Hb_002284_020 Hb_000322_120--Hb_002284_020 Hb_000322_120--Hb_001289_030 Hb_000322_120--Hb_002205_260
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00981129 0.896105 0.253796 0.204906 0 0.00858568
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0891851 0.0350869 0 0.083746 0

CAGE analysis