Hb_009683_060

Information

Type -
Description -
Location Contig9683: 60542-61078
Sequence    

Annotation

kegg
ID -
description -
nr
ID -
description -
swissprot
ID -
description -
trembl
ID -
description -
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009683_060 0.0 - - -
2 Hb_167802_010 0.0375526356 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
3 Hb_104855_020 0.042611794 - - ankyrin repeat-containing protein, putative [Ricinus communis]
4 Hb_001623_020 0.0624927831 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
5 Hb_000904_090 0.0634997728 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
6 Hb_114932_010 0.0675876555 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
7 Hb_000338_020 0.0722345043 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
8 Hb_013726_100 0.0836320387 - - PREDICTED: BON1-associated protein 2 [Jatropha curcas]
9 Hb_008579_010 0.0860250282 - - hypothetical protein JCGZ_01311 [Jatropha curcas]
10 Hb_002475_110 0.0861185862 - - E3 ubiquitin ligase PUB14, putative [Ricinus communis]
11 Hb_143232_020 0.0880078808 - - hypothetical protein JCGZ_20467 [Jatropha curcas]
12 Hb_009707_010 0.0880506721 - - PREDICTED: LOW QUALITY PROTEIN: exocyst complex component EXO70B1-like [Jatropha curcas]
13 Hb_002486_030 0.0882016194 - - PREDICTED: nuclear speckle splicing regulatory protein 1-like [Jatropha curcas]
14 Hb_142691_010 0.0917241045 - - PREDICTED: probable serine/threonine-protein kinase At1g18390 [Jatropha curcas]
15 Hb_000256_050 0.0932687835 - - chitinase, putative [Ricinus communis]
16 Hb_147137_020 0.0937403603 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
17 Hb_000227_410 0.0954266998 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
18 Hb_073423_010 0.0961406707 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
19 Hb_025477_030 0.0966707735 transcription factor TF Family: ERF dehydration-responsive element-binding protein 2 [Manihot esculenta]
20 Hb_000086_600 0.1099243632 - - -

Gene co-expression network

sample Hb_009683_060 Hb_009683_060 Hb_167802_010 Hb_167802_010 Hb_009683_060--Hb_167802_010 Hb_104855_020 Hb_104855_020 Hb_009683_060--Hb_104855_020 Hb_001623_020 Hb_001623_020 Hb_009683_060--Hb_001623_020 Hb_000904_090 Hb_000904_090 Hb_009683_060--Hb_000904_090 Hb_114932_010 Hb_114932_010 Hb_009683_060--Hb_114932_010 Hb_000338_020 Hb_000338_020 Hb_009683_060--Hb_000338_020 Hb_167802_010--Hb_001623_020 Hb_167802_010--Hb_104855_020 Hb_167802_010--Hb_000904_090 Hb_025477_030 Hb_025477_030 Hb_167802_010--Hb_025477_030 Hb_167802_010--Hb_000338_020 Hb_008579_010 Hb_008579_010 Hb_104855_020--Hb_008579_010 Hb_002486_030 Hb_002486_030 Hb_104855_020--Hb_002486_030 Hb_143232_020 Hb_143232_020 Hb_104855_020--Hb_143232_020 Hb_142691_010 Hb_142691_010 Hb_104855_020--Hb_142691_010 Hb_104855_020--Hb_001623_020 Hb_000256_050 Hb_000256_050 Hb_001623_020--Hb_000256_050 Hb_013726_100 Hb_013726_100 Hb_001623_020--Hb_013726_100 Hb_001623_020--Hb_143232_020 Hb_002475_110 Hb_002475_110 Hb_001623_020--Hb_002475_110 Hb_000227_410 Hb_000227_410 Hb_000904_090--Hb_000227_410 Hb_000904_090--Hb_104855_020 Hb_048538_010 Hb_048538_010 Hb_000904_090--Hb_048538_010 Hb_000904_090--Hb_002475_110 Hb_009707_010 Hb_009707_010 Hb_114932_010--Hb_009707_010 Hb_114932_010--Hb_000338_020 Hb_114932_010--Hb_000904_090 Hb_000086_600 Hb_000086_600 Hb_114932_010--Hb_000086_600 Hb_114932_010--Hb_167802_010 Hb_064692_010 Hb_064692_010 Hb_000338_020--Hb_064692_010 Hb_000338_020--Hb_009707_010 Hb_125201_010 Hb_125201_010 Hb_000338_020--Hb_125201_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 0.444547 0.0482878 0.075476 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 0 0

CAGE analysis