Hb_009692_030

Information

Type -
Description -
Location Contig9692: 14296-15036
Sequence    

Annotation

kegg
ID tcc:TCM_019689
description WRKY DNA-binding protein 70, putative isoform 1
nr
ID XP_007033513.1
description WRKY DNA-binding protein 70, putative isoform 2, partial [Theobroma cacao]
swissprot
ID -
description -
trembl
ID A0A061EQ35
description WRKY DNA-binding protein 70, putative isoform 2 (Fragment) OS=Theobroma cacao GN=TCM_019689 PE=4 SV=1
Gene Ontology
ID GO:0003700
description wrky transcription factor 70

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63928: 14720-15441
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009692_030 0.0 - - WRKY DNA-binding protein 70, putative isoform 2, partial [Theobroma cacao]
2 Hb_010223_010 0.1392205769 - - Flavonol 3-sulfotransferase, putative [Ricinus communis]
3 Hb_000997_130 0.139898823 - - DNA binding protein, putative [Ricinus communis]
4 Hb_107174_010 0.148497128 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
5 Hb_000592_070 0.1563388061 - - PREDICTED: probable calcium-binding protein CML27 [Jatropha curcas]
6 Hb_000192_030 0.1585838428 - - PREDICTED: TATA-box-binding protein 2 isoform X1 [Setaria italica]
7 Hb_012400_020 0.1588727105 - - Spotted leaf protein, putative [Ricinus communis]
8 Hb_021142_030 0.1625825847 - - hypothetical protein JCGZ_04974 [Jatropha curcas]
9 Hb_010994_020 0.1633918642 - - PREDICTED: TMV resistance protein N-like isoform X1 [Jatropha curcas]
10 Hb_007894_040 0.1668902565 - - PREDICTED: NEP1-interacting protein 1 isoform X1 [Jatropha curcas]
11 Hb_046610_010 0.1668973244 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
12 Hb_155896_010 0.1686916557 - - PREDICTED: receptor protein kinase CLAVATA1 [Jatropha curcas]
13 Hb_004899_010 0.1712183356 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
14 Hb_100395_010 0.1713083489 - - ankyrin repeat-containing protein, putative [Ricinus communis]
15 Hb_002133_010 0.1727505217 - - PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Jatropha curcas]
16 Hb_002289_180 0.1734520666 - - PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Nelumbo nucifera]
17 Hb_164577_010 0.1735611854 - - hypothetical protein JCGZ_26658 [Jatropha curcas]
18 Hb_008651_010 0.1748708613 - - cytochrome P450, putative [Ricinus communis]
19 Hb_007747_070 0.1755214662 - - PREDICTED: casparian strip membrane protein 1-like [Jatropha curcas]
20 Hb_128083_010 0.1764473904 transcription factor TF Family: C2C2-Dof zinc finger protein, putative [Ricinus communis]

Gene co-expression network

sample Hb_009692_030 Hb_009692_030 Hb_010223_010 Hb_010223_010 Hb_009692_030--Hb_010223_010 Hb_000997_130 Hb_000997_130 Hb_009692_030--Hb_000997_130 Hb_107174_010 Hb_107174_010 Hb_009692_030--Hb_107174_010 Hb_000592_070 Hb_000592_070 Hb_009692_030--Hb_000592_070 Hb_000192_030 Hb_000192_030 Hb_009692_030--Hb_000192_030 Hb_012400_020 Hb_012400_020 Hb_009692_030--Hb_012400_020 Hb_010223_010--Hb_107174_010 Hb_010223_010--Hb_000192_030 Hb_010223_010--Hb_000997_130 Hb_008651_010 Hb_008651_010 Hb_010223_010--Hb_008651_010 Hb_002999_150 Hb_002999_150 Hb_010223_010--Hb_002999_150 Hb_032071_010 Hb_032071_010 Hb_010223_010--Hb_032071_010 Hb_002289_180 Hb_002289_180 Hb_000997_130--Hb_002289_180 Hb_046610_010 Hb_046610_010 Hb_000997_130--Hb_046610_010 Hb_164577_010 Hb_164577_010 Hb_000997_130--Hb_164577_010 Hb_007546_010 Hb_007546_010 Hb_000997_130--Hb_007546_010 Hb_000164_160 Hb_000164_160 Hb_000997_130--Hb_000164_160 Hb_107174_010--Hb_002999_150 Hb_107174_010--Hb_000192_030 Hb_003207_220 Hb_003207_220 Hb_107174_010--Hb_003207_220 Hb_007894_040 Hb_007894_040 Hb_107174_010--Hb_007894_040 Hb_071654_010 Hb_071654_010 Hb_107174_010--Hb_071654_010 Hb_002133_010 Hb_002133_010 Hb_000592_070--Hb_002133_010 Hb_000592_070--Hb_012400_020 Hb_009252_090 Hb_009252_090 Hb_000592_070--Hb_009252_090 Hb_000069_530 Hb_000069_530 Hb_000592_070--Hb_000069_530 Hb_031266_020 Hb_031266_020 Hb_000592_070--Hb_031266_020 Hb_003060_150 Hb_003060_150 Hb_000592_070--Hb_003060_150 Hb_000953_180 Hb_000953_180 Hb_000192_030--Hb_000953_180 Hb_100395_010 Hb_100395_010 Hb_000192_030--Hb_100395_010 Hb_000365_110 Hb_000365_110 Hb_000192_030--Hb_000365_110 Hb_008948_070 Hb_008948_070 Hb_000192_030--Hb_008948_070 Hb_012400_020--Hb_009252_090 Hb_021142_030 Hb_021142_030 Hb_012400_020--Hb_021142_030 Hb_012400_020--Hb_046610_010 Hb_012400_020--Hb_000997_130 Hb_012400_020--Hb_002133_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.84081 3.04453 0.773785 0.0352175 0.101935
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0682076 0 0 0

CAGE analysis