Hb_009697_010

Information

Type -
Description -
Location Contig9697: 24058-28997
Sequence    

Annotation

kegg
ID rcu:RCOM_1318690
description hypothetical protein
nr
ID XP_002529264.1
description conserved hypothetical protein [Ricinus communis]
swissprot
ID -
description -
trembl
ID B9STE5
description Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1318690 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009697_010 0.0 - - conserved hypothetical protein [Ricinus communis]
2 Hb_039410_010 0.1106749068 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
3 Hb_165552_020 0.1122770524 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
4 Hb_003602_080 0.11740508 - - hypothetical protein POPTR_0002s10890g [Populus trichocarpa]
5 Hb_011429_010 0.1225554177 - - hypothetical protein POPTR_0188s00230g [Populus trichocarpa]
6 Hb_010012_020 0.1250071645 - - conserved hypothetical protein [Ricinus communis]
7 Hb_000769_030 0.1289818872 - - ankyrin repeat-containing protein, putative [Ricinus communis]
8 Hb_098175_010 0.1299771205 - - hypothetical protein JCGZ_23771 [Jatropha curcas]
9 Hb_043115_010 0.1303237268 - - hypothetical protein JCGZ_16710 [Jatropha curcas]
10 Hb_010573_030 0.1308831901 - - conserved hypothetical protein [Ricinus communis]
11 Hb_000203_090 0.1309499062 - - hypothetical protein POPTR_0013s04080g [Populus trichocarpa]
12 Hb_002420_030 0.1317696208 - - Disease resistance protein RPS5, putative [Ricinus communis]
13 Hb_003674_010 0.1403564728 - - purine transporter, putative [Ricinus communis]
14 Hb_005040_010 0.1434179543 - - hypothetical protein RCOM_1110360 [Ricinus communis]
15 Hb_002422_020 0.1475179428 - - PREDICTED: E3 ubiquitin-protein ligase UPL5 [Jatropha curcas]
16 Hb_007728_010 0.1489344183 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Jatropha curcas]
17 Hb_013591_010 0.1538764679 - - Mitogen-activated protein kinase kinase kinase 1 [Glycine soja]
18 Hb_000167_090 0.1542197946 - - conserved hypothetical protein [Ricinus communis]
19 Hb_004724_290 0.1642826101 transcription factor TF Family: NAC -
20 Hb_001957_050 0.1647134055 - - PREDICTED: UPF0481 protein At3g47200-like [Jatropha curcas]

Gene co-expression network

sample Hb_009697_010 Hb_009697_010 Hb_039410_010 Hb_039410_010 Hb_009697_010--Hb_039410_010 Hb_165552_020 Hb_165552_020 Hb_009697_010--Hb_165552_020 Hb_003602_080 Hb_003602_080 Hb_009697_010--Hb_003602_080 Hb_011429_010 Hb_011429_010 Hb_009697_010--Hb_011429_010 Hb_010012_020 Hb_010012_020 Hb_009697_010--Hb_010012_020 Hb_000769_030 Hb_000769_030 Hb_009697_010--Hb_000769_030 Hb_000203_090 Hb_000203_090 Hb_039410_010--Hb_000203_090 Hb_000167_090 Hb_000167_090 Hb_039410_010--Hb_000167_090 Hb_039410_010--Hb_165552_020 Hb_005040_010 Hb_005040_010 Hb_039410_010--Hb_005040_010 Hb_001957_050 Hb_001957_050 Hb_039410_010--Hb_001957_050 Hb_039410_010--Hb_003602_080 Hb_165552_020--Hb_005040_010 Hb_002420_030 Hb_002420_030 Hb_165552_020--Hb_002420_030 Hb_007728_010 Hb_007728_010 Hb_165552_020--Hb_007728_010 Hb_010573_030 Hb_010573_030 Hb_165552_020--Hb_010573_030 Hb_011609_060 Hb_011609_060 Hb_165552_020--Hb_011609_060 Hb_165552_020--Hb_010012_020 Hb_003602_080--Hb_010012_020 Hb_003602_080--Hb_011429_010 Hb_003602_080--Hb_000769_030 Hb_003602_080--Hb_165552_020 Hb_098175_010 Hb_098175_010 Hb_003602_080--Hb_098175_010 Hb_011429_010--Hb_000769_030 Hb_004724_290 Hb_004724_290 Hb_011429_010--Hb_004724_290 Hb_011429_010--Hb_098175_010 Hb_128460_020 Hb_128460_020 Hb_011429_010--Hb_128460_020 Hb_010369_010 Hb_010369_010 Hb_011429_010--Hb_010369_010 Hb_003674_010 Hb_003674_010 Hb_010012_020--Hb_003674_010 Hb_010012_020--Hb_002420_030 Hb_010012_020--Hb_010573_030 Hb_010012_020--Hb_011429_010 Hb_000769_030--Hb_128460_020 Hb_014361_140 Hb_014361_140 Hb_000769_030--Hb_014361_140 Hb_053935_010 Hb_053935_010 Hb_000769_030--Hb_053935_010 Hb_000769_030--Hb_010369_010 Hb_000769_030--Hb_004724_290
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0 1.2225 0.206711 0.932838 0 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0409378 0 0 0 0

CAGE analysis