Hb_009707_010

Information

Type -
Description -
Location Contig9707: 16031-17905
Sequence    

Annotation

kegg
ID rcu:RCOM_0392600
description protein binding protein, putative
nr
ID XP_012064957.1
description PREDICTED: LOW QUALITY PROTEIN: exocyst complex component EXO70B1-like [Jatropha curcas]
swissprot
ID Q9LZD3
description Exocyst complex component EXO70A1 OS=Arabidopsis thaliana GN=EXO70A1 PE=1 SV=1
trembl
ID B9T911
description Protein binding protein, putative OS=Ricinus communis GN=RCOM_0392600 PE=4 SV=1
Gene Ontology
ID GO:0000145
description exocyst complex component exo70b1-like

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009707_010 0.0 - - PREDICTED: LOW QUALITY PROTEIN: exocyst complex component EXO70B1-like [Jatropha curcas]
2 Hb_114932_010 0.0578834163 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
3 Hb_125201_010 0.0620658569 - - hypothetical protein POPTR_0004s03690g [Populus trichocarpa]
4 Hb_000338_020 0.0734808256 - - PREDICTED: tryptophan synthase beta chain 1 [Jatropha curcas]
5 Hb_000086_600 0.0752279728 - - -
6 Hb_000904_090 0.083472339 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF109-like [Jatropha curcas]
7 Hb_009683_060 0.0880506721 - - -
8 Hb_025477_020 0.0966192185 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF027 [Jatropha curcas]
9 Hb_000227_410 0.0983618874 - - PREDICTED: uncharacterized protein LOC105631970 [Jatropha curcas]
10 Hb_147137_020 0.0995077233 - - hypothetical protein JCGZ_07227 [Jatropha curcas]
11 Hb_167802_010 0.1001414254 - - PREDICTED: receptor-like protein 12 [Populus euphratica]
12 Hb_006648_030 0.1008373873 - - Indole-3-acetic acid-amido synthetase GH3.3, putative [Ricinus communis]
13 Hb_104855_020 0.1019907842 - - ankyrin repeat-containing protein, putative [Ricinus communis]
14 Hb_005618_020 0.1037643827 - - hypothetical protein RCOM_1342750 [Ricinus communis]
15 Hb_117602_010 0.1043880937 - - dimethylaniline monooxygenase, putative [Ricinus communis]
16 Hb_064692_010 0.1048342687 - - PREDICTED: probable receptor-like protein kinase At1g67000 [Jatropha curcas]
17 Hb_002922_010 0.1049287234 - - heavy-metal-associated domain-containing family protein [Populus trichocarpa]
18 Hb_027506_060 0.1051864048 transcription factor TF Family: Tify JAZ7 [Hevea brasiliensis]
19 Hb_041534_010 0.1094067698 transcription factor TF Family: ERF PREDICTED: ethylene-responsive transcription factor ERF017 [Jatropha curcas]
20 Hb_004586_120 0.1124557094 - - PREDICTED: mitochondrial uncoupling protein 5 [Jatropha curcas]

Gene co-expression network

sample Hb_009707_010 Hb_009707_010 Hb_114932_010 Hb_114932_010 Hb_009707_010--Hb_114932_010 Hb_125201_010 Hb_125201_010 Hb_009707_010--Hb_125201_010 Hb_000338_020 Hb_000338_020 Hb_009707_010--Hb_000338_020 Hb_000086_600 Hb_000086_600 Hb_009707_010--Hb_000086_600 Hb_000904_090 Hb_000904_090 Hb_009707_010--Hb_000904_090 Hb_009683_060 Hb_009683_060 Hb_009707_010--Hb_009683_060 Hb_114932_010--Hb_000338_020 Hb_114932_010--Hb_009683_060 Hb_114932_010--Hb_000904_090 Hb_114932_010--Hb_000086_600 Hb_167802_010 Hb_167802_010 Hb_114932_010--Hb_167802_010 Hb_004586_120 Hb_004586_120 Hb_125201_010--Hb_004586_120 Hb_125201_010--Hb_000338_020 Hb_005618_020 Hb_005618_020 Hb_125201_010--Hb_005618_020 Hb_157957_010 Hb_157957_010 Hb_125201_010--Hb_157957_010 Hb_125201_010--Hb_114932_010 Hb_064692_010 Hb_064692_010 Hb_000338_020--Hb_064692_010 Hb_000338_020--Hb_009683_060 Hb_000338_020--Hb_167802_010 Hb_117602_010 Hb_117602_010 Hb_000086_600--Hb_117602_010 Hb_000086_600--Hb_005618_020 Hb_005843_080 Hb_005843_080 Hb_000086_600--Hb_005843_080 Hb_147137_020 Hb_147137_020 Hb_000086_600--Hb_147137_020 Hb_000227_410 Hb_000227_410 Hb_000904_090--Hb_000227_410 Hb_000904_090--Hb_009683_060 Hb_104855_020 Hb_104855_020 Hb_000904_090--Hb_104855_020 Hb_048538_010 Hb_048538_010 Hb_000904_090--Hb_048538_010 Hb_002475_110 Hb_002475_110 Hb_000904_090--Hb_002475_110 Hb_000904_090--Hb_167802_010 Hb_009683_060--Hb_167802_010 Hb_009683_060--Hb_104855_020 Hb_001623_020 Hb_001623_020 Hb_009683_060--Hb_001623_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0238976 24.4 4.02557 4.43396 0.0599099 0.00933707
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0.0953991 0.036116 0.0607653 0.040243

CAGE analysis