Hb_009711_030

Information

Type -
Description -
Location Contig9711: 16293-20341
Sequence    

Annotation

kegg
ID rcu:RCOM_1122750
description hypothetical protein
nr
ID XP_012089409.1
description PREDICTED: uncharacterized protein LOC105647792 isoform X1 [Jatropha curcas]
swissprot
ID -
description -
trembl
ID A0A067JLW5
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_23611 PE=4 SV=1
Gene Ontology
ID -
description -

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_63954: 16353-20111
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009711_030 0.0 - - PREDICTED: uncharacterized protein LOC105647792 isoform X1 [Jatropha curcas]
2 Hb_022250_040 0.0413590159 - - PREDICTED: succinate dehydrogenase assembly factor 2, mitochondrial [Jatropha curcas]
3 Hb_125000_010 0.0517637615 - - PREDICTED: protein SCO1 homolog 2, mitochondrial [Jatropha curcas]
4 Hb_000371_080 0.0535414033 - - ubiquitin-conjugating enzyme m, putative [Ricinus communis]
5 Hb_001008_060 0.0546883159 - - PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Jatropha curcas]
6 Hb_001824_070 0.0571423868 - - H/ACA ribonucleoprotein complex subunit, putative [Ricinus communis]
7 Hb_002097_110 0.0572161734 - - ankyrin repeat-containing protein, putative [Ricinus communis]
8 Hb_004662_030 0.0573189971 - - hypothetical protein PRUPE_ppa012487mg [Prunus persica]
9 Hb_002078_450 0.0597252438 - - nuclear transport factor, putative [Ricinus communis]
10 Hb_003540_040 0.0642277334 - - hypothetical protein JCGZ_20979 [Jatropha curcas]
11 Hb_000703_140 0.0656142895 - - transcription initiation factor TFIID subunit 13-like [Jatropha curcas]
12 Hb_010436_070 0.0670212112 - - PREDICTED: endoribonuclease Dicer homolog 4-like [Nicotiana tomentosiformis]
13 Hb_000376_050 0.0676281788 - - polyadenylate-binding protein, putative [Ricinus communis]
14 Hb_024835_030 0.0678978177 - - ubiquitin-conjugating enzyme E2, putative [Ricinus communis]
15 Hb_005686_110 0.0694359474 - - PREDICTED: putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase 2 [Populus euphratica]
16 Hb_011794_070 0.0697733162 - - PREDICTED: 60S ribosomal protein L36-2-like [Jatropha curcas]
17 Hb_003878_190 0.0711863181 - - hypothetical protein POPTR_0011s11040g [Populus trichocarpa]
18 Hb_001584_070 0.0717369627 - - conserved hypothetical protein [Ricinus communis]
19 Hb_005997_010 0.0732137891 - - Dihydroorotate dehydrogenase (quinone) [Morus notabilis]
20 Hb_000928_240 0.0732415739 - - PREDICTED: uncharacterized protein LOC105632515 [Jatropha curcas]

Gene co-expression network

sample Hb_009711_030 Hb_009711_030 Hb_022250_040 Hb_022250_040 Hb_009711_030--Hb_022250_040 Hb_125000_010 Hb_125000_010 Hb_009711_030--Hb_125000_010 Hb_000371_080 Hb_000371_080 Hb_009711_030--Hb_000371_080 Hb_001008_060 Hb_001008_060 Hb_009711_030--Hb_001008_060 Hb_001824_070 Hb_001824_070 Hb_009711_030--Hb_001824_070 Hb_002097_110 Hb_002097_110 Hb_009711_030--Hb_002097_110 Hb_022250_040--Hb_000371_080 Hb_002078_450 Hb_002078_450 Hb_022250_040--Hb_002078_450 Hb_004662_030 Hb_004662_030 Hb_022250_040--Hb_004662_030 Hb_002603_100 Hb_002603_100 Hb_022250_040--Hb_002603_100 Hb_022250_040--Hb_125000_010 Hb_010436_070 Hb_010436_070 Hb_125000_010--Hb_010436_070 Hb_003540_040 Hb_003540_040 Hb_125000_010--Hb_003540_040 Hb_118419_020 Hb_118419_020 Hb_125000_010--Hb_118419_020 Hb_002411_170 Hb_002411_170 Hb_125000_010--Hb_002411_170 Hb_005686_110 Hb_005686_110 Hb_000371_080--Hb_005686_110 Hb_003020_230 Hb_003020_230 Hb_000371_080--Hb_003020_230 Hb_000371_080--Hb_001824_070 Hb_005997_010 Hb_005997_010 Hb_000371_080--Hb_005997_010 Hb_001008_060--Hb_002078_450 Hb_001008_060--Hb_022250_040 Hb_000085_320 Hb_000085_320 Hb_001008_060--Hb_000085_320 Hb_011794_070 Hb_011794_070 Hb_001008_060--Hb_011794_070 Hb_000703_140 Hb_000703_140 Hb_001008_060--Hb_000703_140 Hb_001477_110 Hb_001477_110 Hb_001824_070--Hb_001477_110 Hb_001584_070 Hb_001584_070 Hb_001824_070--Hb_001584_070 Hb_003878_190 Hb_003878_190 Hb_001824_070--Hb_003878_190 Hb_000465_060 Hb_000465_060 Hb_001824_070--Hb_000465_060 Hb_002097_110--Hb_004662_030 Hb_015001_020 Hb_015001_020 Hb_002097_110--Hb_015001_020 Hb_007426_230 Hb_007426_230 Hb_002097_110--Hb_007426_230 Hb_027472_180 Hb_027472_180 Hb_002097_110--Hb_027472_180 Hb_002097_110--Hb_001824_070
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
78.2529 19.3739 15.5767 28.8553 68.014 79.0801
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
98.6673 105.697 65.7306 30.1664 13.959

CAGE analysis