Hb_009740_010

Information

Type -
Description -
Location Contig9740: 12659-14044
Sequence    

Annotation

kegg
ID rcu:RCOM_0901450
description receptor-kinase, putative (EC:1.3.1.74 2.7.10.2)
nr
ID XP_002517677.1
description receptor-kinase, putative [Ricinus communis]
swissprot
ID Q3ZC49
description Leucine-rich repeat-containing protein 39 OS=Bos taurus GN=LRRC39 PE=2 SV=1
trembl
ID B9RVA8
description Receptor-kinase, putative OS=Ricinus communis GN=RCOM_0901450 PE=4 SV=1
Gene Ontology
ID GO:0016020
description receptor-like protein kinase at3g47110

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009740_010 0.0 - - receptor-kinase, putative [Ricinus communis]
2 Hb_023827_010 0.048274011 - - Cucumber peeling cupredoxin, putative [Ricinus communis]
3 Hb_000871_020 0.0504514247 - - receptor-kinase, putative [Ricinus communis]
4 Hb_030593_010 0.0513926609 - - hypothetical protein JCGZ_06063 [Jatropha curcas]
5 Hb_001766_090 0.0570980041 - - hypothetical protein JCGZ_23602 [Jatropha curcas]
6 Hb_007658_030 0.0732272137 - - PREDICTED: lupeol synthase-like isoform X1 [Populus euphratica]
7 Hb_000484_050 0.0738862971 - - hypothetical protein CICLE_v10028549mg [Citrus clementina]
8 Hb_011909_130 0.0784297638 transcription factor TF Family: MYB PREDICTED: transcription factor MYB86 [Populus euphratica]
9 Hb_034558_010 0.0814337484 - - -
10 Hb_011924_030 0.0867145772 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
11 Hb_064855_010 0.0884575934 - - ankyrin repeat-containing protein, putative [Ricinus communis]
12 Hb_000016_290 0.0893672402 - - multidrug resistance pump, putative [Ricinus communis]
13 Hb_128894_010 0.0894346016 - - serine-threonine protein kinase, plant-type, putative [Ricinus communis]
14 Hb_011639_130 0.0976229181 - - mads box protein, putative [Ricinus communis]
15 Hb_004829_050 0.098543483 - - hypothetical protein TRIUR3_09654 [Triticum urartu]
16 Hb_106595_010 0.0988988079 - - hypothetical protein B456_003G065300 [Gossypium raimondii]
17 Hb_030312_060 0.1017689285 - - PREDICTED: uncharacterized protein LOC105634226 [Jatropha curcas]
18 Hb_001403_100 0.1038577878 - - hypothetical protein CICLE_v10017457mg, partial [Citrus clementina]
19 Hb_000796_100 0.1041585567 transcription factor TF Family: MYB r2r3-myb transcription factor, putative [Ricinus communis]
20 Hb_001104_260 0.1041733168 - - hypothetical protein JCGZ_23628 [Jatropha curcas]

Gene co-expression network

sample Hb_009740_010 Hb_009740_010 Hb_023827_010 Hb_023827_010 Hb_009740_010--Hb_023827_010 Hb_000871_020 Hb_000871_020 Hb_009740_010--Hb_000871_020 Hb_030593_010 Hb_030593_010 Hb_009740_010--Hb_030593_010 Hb_001766_090 Hb_001766_090 Hb_009740_010--Hb_001766_090 Hb_007658_030 Hb_007658_030 Hb_009740_010--Hb_007658_030 Hb_000484_050 Hb_000484_050 Hb_009740_010--Hb_000484_050 Hb_023827_010--Hb_030593_010 Hb_023827_010--Hb_001766_090 Hb_023827_010--Hb_007658_030 Hb_023827_010--Hb_000484_050 Hb_011909_130 Hb_011909_130 Hb_023827_010--Hb_011909_130 Hb_011924_030 Hb_011924_030 Hb_000871_020--Hb_011924_030 Hb_000871_020--Hb_023827_010 Hb_000871_020--Hb_030593_010 Hb_000871_020--Hb_001766_090 Hb_064855_010 Hb_064855_010 Hb_000871_020--Hb_064855_010 Hb_030593_010--Hb_001766_090 Hb_030593_010--Hb_007658_030 Hb_030593_010--Hb_000484_050 Hb_030593_010--Hb_011909_130 Hb_034558_010 Hb_034558_010 Hb_001766_090--Hb_034558_010 Hb_001766_090--Hb_007658_030 Hb_128894_010 Hb_128894_010 Hb_001766_090--Hb_128894_010 Hb_001766_090--Hb_000484_050 Hb_007658_030--Hb_000484_050 Hb_007658_030--Hb_011909_130 Hb_007658_030--Hb_034558_010 Hb_007658_030--Hb_128894_010 Hb_000484_050--Hb_011909_130 Hb_000484_050--Hb_034558_010 Hb_011639_130 Hb_011639_130 Hb_000484_050--Hb_011639_130
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.0734216 128.453 0.0471159 0.857166 0 0.320095
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0 0 0 10.213 0.197116

CAGE analysis