Hb_009767_060

Information

Type -
Description -
Location Contig9767: 49645-53112
Sequence    

Annotation

kegg
ID rcu:RCOM_0912240
description hypothetical protein
nr
ID XP_012069618.1
description PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
swissprot
ID Q9CAV6
description Serine/threonine-protein kinase WNK1 OS=Arabidopsis thaliana GN=WNK1 PE=1 SV=1
trembl
ID A0A067KYY3
description Uncharacterized protein OS=Jatropha curcas GN=JCGZ_02166 PE=4 SV=1
Gene Ontology
ID GO:0004672
description probable serine threonine-protein kinase wnk9

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64114: 50537-53364
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009767_060 0.0 - - PREDICTED: probable serine/threonine-protein kinase WNK9 [Jatropha curcas]
2 Hb_032572_010 0.0823210674 - - PREDICTED: phospholipase A2-alpha [Jatropha curcas]
3 Hb_000303_060 0.0863568829 - - o-methyltransferase, putative [Ricinus communis]
4 Hb_002045_010 0.0895783354 - - PREDICTED: F-box/LRR-repeat protein 17 [Jatropha curcas]
5 Hb_004122_010 0.0995743568 - - PREDICTED: uncharacterized protein LOC105630923 [Jatropha curcas]
6 Hb_001396_030 0.1009188585 - - hypothetical protein POPTR_0001s13520g [Populus trichocarpa]
7 Hb_001287_090 0.1013984571 - - Endoglucanase 4 [Aegilops tauschii]
8 Hb_005181_170 0.1038029785 - - PREDICTED: aldehyde dehydrogenase 22A1 [Jatropha curcas]
9 Hb_027506_030 0.1041254376 - - 9-cis-epoxycarotenoid dioxygenase, putative [Ricinus communis]
10 Hb_000112_080 0.1057296974 - - PREDICTED: glutamate receptor 2.1-like [Populus euphratica]
11 Hb_012518_080 0.1083666651 - - PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Jatropha curcas]
12 Hb_005675_050 0.1092985533 - - alpha-glucosidase, putative [Ricinus communis]
13 Hb_085962_010 0.1098565221 - - hypothetical protein POPTR_0017s11380g [Populus trichocarpa]
14 Hb_029639_030 0.1116305121 - - PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 2-like [Jatropha curcas]
15 Hb_004330_040 0.1127747662 - - conserved hypothetical protein [Ricinus communis]
16 Hb_000347_100 0.1156057045 transcription factor TF Family: C3H hypothetical protein RCOM_0684740 [Ricinus communis]
17 Hb_000996_030 0.1161124163 - - PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g63430 isoform X1 [Jatropha curcas]
18 Hb_002805_180 0.1162534398 - - conserved hypothetical protein [Ricinus communis]
19 Hb_003097_130 0.1164813658 - - conserved hypothetical protein [Ricinus communis]
20 Hb_032260_060 0.1165948728 transcription factor TF Family: MYB-related Homeodomain-like superfamily protein [Theobroma cacao]

Gene co-expression network

sample Hb_009767_060 Hb_009767_060 Hb_032572_010 Hb_032572_010 Hb_009767_060--Hb_032572_010 Hb_000303_060 Hb_000303_060 Hb_009767_060--Hb_000303_060 Hb_002045_010 Hb_002045_010 Hb_009767_060--Hb_002045_010 Hb_004122_010 Hb_004122_010 Hb_009767_060--Hb_004122_010 Hb_001396_030 Hb_001396_030 Hb_009767_060--Hb_001396_030 Hb_001287_090 Hb_001287_090 Hb_009767_060--Hb_001287_090 Hb_001958_010 Hb_001958_010 Hb_032572_010--Hb_001958_010 Hb_027506_030 Hb_027506_030 Hb_032572_010--Hb_027506_030 Hb_085962_010 Hb_085962_010 Hb_032572_010--Hb_085962_010 Hb_000189_180 Hb_000189_180 Hb_032572_010--Hb_000189_180 Hb_032572_010--Hb_000303_060 Hb_000303_060--Hb_027506_030 Hb_000303_060--Hb_085962_010 Hb_000303_060--Hb_001396_030 Hb_010264_020 Hb_010264_020 Hb_000303_060--Hb_010264_020 Hb_004804_010 Hb_004804_010 Hb_000303_060--Hb_004804_010 Hb_002805_180 Hb_002805_180 Hb_002045_010--Hb_002805_180 Hb_000359_180 Hb_000359_180 Hb_002045_010--Hb_000359_180 Hb_005181_170 Hb_005181_170 Hb_002045_010--Hb_005181_170 Hb_000739_170 Hb_000739_170 Hb_002045_010--Hb_000739_170 Hb_004330_040 Hb_004330_040 Hb_002045_010--Hb_004330_040 Hb_005675_050 Hb_005675_050 Hb_004122_010--Hb_005675_050 Hb_000297_210 Hb_000297_210 Hb_004122_010--Hb_000297_210 Hb_001514_030 Hb_001514_030 Hb_004122_010--Hb_001514_030 Hb_007632_160 Hb_007632_160 Hb_004122_010--Hb_007632_160 Hb_168918_010 Hb_168918_010 Hb_004122_010--Hb_168918_010 Hb_004122_010--Hb_005181_170 Hb_001396_030--Hb_085962_010 Hb_001396_030--Hb_027506_030 Hb_000112_080 Hb_000112_080 Hb_001396_030--Hb_000112_080 Hb_007218_040 Hb_007218_040 Hb_001396_030--Hb_007218_040 Hb_005542_120 Hb_005542_120 Hb_001396_030--Hb_005542_120 Hb_001287_090--Hb_001396_030 Hb_001541_130 Hb_001541_130 Hb_001287_090--Hb_001541_130 Hb_001287_090--Hb_168918_010 Hb_001287_090--Hb_085962_010 Hb_007811_020 Hb_007811_020 Hb_001287_090--Hb_007811_020
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.00892653 0.767668 13.0966 15.7451 0.0167117 0.0254845
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0608229 0.0957179 0.0606536 4.36913 8.72186

CAGE analysis