Hb_009773_020

Information

Type -
Description -
Location Contig9773: 23081-27405
Sequence    

Annotation

kegg
ID pop:POPTR_0019s09910g
description POPTRDRAFT_826213; molybdenum cofactor synthesis family protein
nr
ID XP_012076932.1
description PREDICTED: molybdopterin synthase sulfur carrier subunit [Jatropha curcas]
swissprot
ID Q9S7A3
description Molybdopterin synthase sulfur carrier subunit OS=Arabidopsis thaliana GN=At4g10100 PE=2 SV=1
trembl
ID A0A067LLG1
description Molybdopterin synthase sulfur carrier subunit OS=Jatropha curcas GN=JCGZ_17202 PE=3 SV=1
Gene Ontology
ID GO:0005829
description molybdopterin synthase sulfur carrier subunit

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 PASA_asmbl_64206: 23092-27392 , PASA_asmbl_64207: 23162-26753
cDNA
(Sanger)
(ID:Location)		 027_H05.ab1: 23092-27319

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009773_020 0.0 - - PREDICTED: molybdopterin synthase sulfur carrier subunit [Jatropha curcas]
2 Hb_002030_040 0.0545776921 - - hypothetical protein JCGZ_18677 [Jatropha curcas]
3 Hb_065525_020 0.0667846192 - - PREDICTED: geranylgeranyl transferase type-1 subunit beta [Jatropha curcas]
4 Hb_000103_560 0.066857407 - - ADP-ribosylation factor, putative [Ricinus communis]
5 Hb_000840_030 0.0695877736 transcription factor TF Family: IWS1 PREDICTED: probable mediator of RNA polymerase II transcription subunit 26c isoform X2 [Jatropha curcas]
6 Hb_001105_070 0.0705316628 - - PREDICTED: uncharacterized protein LOC105632829 [Jatropha curcas]
7 Hb_002301_140 0.0707235087 - - PREDICTED: uncharacterized protein At4g28440 [Jatropha curcas]
8 Hb_004324_310 0.0710818566 - - conserved hypothetical protein [Ricinus communis]
9 Hb_158467_010 0.0741461728 - - transporter, putative [Ricinus communis]
10 Hb_005686_060 0.0748208045 - - PREDICTED: uncharacterized protein LOC101508199 [Cicer arietinum]
11 Hb_001008_060 0.07623698 - - PREDICTED: monothiol glutaredoxin-S15, mitochondrial [Jatropha curcas]
12 Hb_002874_190 0.0767649198 - - proteasome subunit beta type 6,9, putative [Ricinus communis]
13 Hb_010172_080 0.078275826 - - acetylglucosaminyltransferase, putative [Ricinus communis]
14 Hb_000987_070 0.0806060062 - - Inflorescence meristem receptor-like kinase 2 isoform 1 [Theobroma cacao]
15 Hb_005431_010 0.0813306525 - - PREDICTED: glycine cleavage system H protein 2, mitochondrial [Jatropha curcas]
16 Hb_165132_010 0.0819002529 - - PREDICTED: uncharacterized protein LOC105134496 [Populus euphratica]
17 Hb_002774_060 0.0827258329 - - PREDICTED: uncharacterized protein LOC105630599 isoform X2 [Jatropha curcas]
18 Hb_000085_320 0.0828530159 - - Uncharacterized protein TCM_030749 [Theobroma cacao]
19 Hb_002078_150 0.0833058065 - - protein with unknown function [Ricinus communis]
20 Hb_000329_030 0.0835724811 - - PREDICTED: uncharacterized protein LOC105643133 isoform X1 [Jatropha curcas]

Gene co-expression network

sample Hb_009773_020 Hb_009773_020 Hb_002030_040 Hb_002030_040 Hb_009773_020--Hb_002030_040 Hb_065525_020 Hb_065525_020 Hb_009773_020--Hb_065525_020 Hb_000103_560 Hb_000103_560 Hb_009773_020--Hb_000103_560 Hb_000840_030 Hb_000840_030 Hb_009773_020--Hb_000840_030 Hb_001105_070 Hb_001105_070 Hb_009773_020--Hb_001105_070 Hb_002301_140 Hb_002301_140 Hb_009773_020--Hb_002301_140 Hb_002030_040--Hb_000840_030 Hb_004204_120 Hb_004204_120 Hb_002030_040--Hb_004204_120 Hb_002030_040--Hb_065525_020 Hb_002105_090 Hb_002105_090 Hb_002030_040--Hb_002105_090 Hb_004324_310 Hb_004324_310 Hb_002030_040--Hb_004324_310 Hb_158467_010 Hb_158467_010 Hb_065525_020--Hb_158467_010 Hb_010042_010 Hb_010042_010 Hb_065525_020--Hb_010042_010 Hb_000934_250 Hb_000934_250 Hb_065525_020--Hb_000934_250 Hb_065525_020--Hb_001105_070 Hb_063716_050 Hb_063716_050 Hb_000103_560--Hb_063716_050 Hb_000832_140 Hb_000832_140 Hb_000103_560--Hb_000832_140 Hb_001604_080 Hb_001604_080 Hb_000103_560--Hb_001604_080 Hb_000815_040 Hb_000815_040 Hb_000103_560--Hb_000815_040 Hb_002078_150 Hb_002078_150 Hb_000103_560--Hb_002078_150 Hb_000529_190 Hb_000529_190 Hb_000103_560--Hb_000529_190 Hb_153112_020 Hb_153112_020 Hb_000840_030--Hb_153112_020 Hb_000331_080 Hb_000331_080 Hb_000840_030--Hb_000331_080 Hb_005539_350 Hb_005539_350 Hb_000840_030--Hb_005539_350 Hb_002874_190 Hb_002874_190 Hb_000840_030--Hb_002874_190 Hb_006541_030 Hb_006541_030 Hb_000840_030--Hb_006541_030 Hb_005431_010 Hb_005431_010 Hb_001105_070--Hb_005431_010 Hb_000025_120 Hb_000025_120 Hb_001105_070--Hb_000025_120 Hb_012053_070 Hb_012053_070 Hb_001105_070--Hb_012053_070 Hb_000987_070 Hb_000987_070 Hb_001105_070--Hb_000987_070 Hb_028995_040 Hb_028995_040 Hb_002301_140--Hb_028995_040 Hb_000200_100 Hb_000200_100 Hb_002301_140--Hb_000200_100 Hb_023226_040 Hb_023226_040 Hb_002301_140--Hb_023226_040 Hb_002007_060 Hb_002007_060 Hb_002301_140--Hb_002007_060 Hb_001235_190 Hb_001235_190 Hb_002301_140--Hb_001235_190
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
52.5014 17.1451 18.9608 36.2039 34.9725 44.2879
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
65.2116 68.2448 54.6146 21.3197 12.2421

CAGE analysis