Hb_009777_010

Information

Type -
Description -
Location Contig9777: 901-15764
Sequence    

Annotation

kegg
ID egr:104455145
description uncharacterized LOC104455145
nr
ID XP_009630466.1
description PREDICTED: uncharacterized protein LOC104120414 [Nicotiana tomentosiformis]
swissprot
ID -
description -
trembl
ID A5BQA7
description Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_001910 PE=4 SV=1
Gene Ontology
ID GO:0003676
description PREDICTED: uncharacterized protein LOC104227769, partial

Full-length cDNA clone information

cDNA+EST
(Sanger&Illumina)
(ID:Location)		 -
cDNA
(Sanger)
(ID:Location)		 -

Similar expressed genes (Top20)


Rank Gene Score (JSD) Function Description NCBI(nr) information
1 Hb_009777_010 0.0 - - PREDICTED: uncharacterized protein LOC104120414 [Nicotiana tomentosiformis]
2 Hb_001863_060 0.2254706343 - - PIF-like transposase [Daucus carota]
3 Hb_001437_290 0.2355612754 - - -
4 Hb_166511_010 0.2808311774 - - -
5 Hb_001135_230 0.3167655628 - - PREDICTED: protein REVEILLE 6-like isoform X3 [Gossypium raimondii]
6 Hb_000614_330 0.3190729749 - - hypothetical protein POPTR_0008s18070g [Populus trichocarpa]
7 Hb_012404_030 0.3362801944 transcription factor TF Family: GRF PREDICTED: growth-regulating factor 3 [Jatropha curcas]
8 Hb_000205_170 0.3462909003 - - PREDICTED: uncharacterized protein LOC103926801 [Pyrus x bretschneideri]
9 Hb_000350_110 0.3472892477 - - PREDICTED: uncharacterized protein LOC104220461 isoform X2 [Nicotiana sylvestris]
10 Hb_022212_010 0.3474396503 - - -
11 Hb_004466_010 0.3590102902 - - PREDICTED: isoflavone reductase-like protein [Jatropha curcas]
12 Hb_027751_030 0.3655730109 - - -
13 Hb_002099_020 0.3681790562 - - cysteine proteinase inhibitor-like [Jatropha curcas]
14 Hb_004584_010 0.3684792313 - - PREDICTED: uncharacterized protein LOC104094989 [Nicotiana tomentosiformis]
15 Hb_003058_050 0.3691040055 - - PREDICTED: uncharacterized protein LOC105636491 [Jatropha curcas]
16 Hb_000284_160 0.3691786334 - - PREDICTED: TMV resistance protein N-like [Jatropha curcas]
17 Hb_011037_010 0.369718385 - - PREDICTED: uncharacterized protein LOC105778976 [Gossypium raimondii]
18 Hb_000538_150 0.3749874544 - - PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Jatropha curcas]
19 Hb_004297_060 0.3821784471 - - Cucumisin protein [Theobroma cacao]
20 Hb_148908_020 0.3834746546 - - -

Gene co-expression network

sample Hb_009777_010 Hb_009777_010 Hb_001863_060 Hb_001863_060 Hb_009777_010--Hb_001863_060 Hb_001437_290 Hb_001437_290 Hb_009777_010--Hb_001437_290 Hb_166511_010 Hb_166511_010 Hb_009777_010--Hb_166511_010 Hb_001135_230 Hb_001135_230 Hb_009777_010--Hb_001135_230 Hb_000614_330 Hb_000614_330 Hb_009777_010--Hb_000614_330 Hb_012404_030 Hb_012404_030 Hb_009777_010--Hb_012404_030 Hb_000350_110 Hb_000350_110 Hb_001863_060--Hb_000350_110 Hb_022212_010 Hb_022212_010 Hb_001863_060--Hb_022212_010 Hb_153231_040 Hb_153231_040 Hb_001863_060--Hb_153231_040 Hb_004297_060 Hb_004297_060 Hb_001863_060--Hb_004297_060 Hb_148908_020 Hb_148908_020 Hb_001863_060--Hb_148908_020 Hb_001437_290--Hb_001135_230 Hb_000205_170 Hb_000205_170 Hb_001437_290--Hb_000205_170 Hb_001437_290--Hb_004297_060 Hb_001437_290--Hb_148908_020 Hb_002099_020 Hb_002099_020 Hb_001437_290--Hb_002099_020 Hb_001993_020 Hb_001993_020 Hb_166511_010--Hb_001993_020 Hb_012662_010 Hb_012662_010 Hb_166511_010--Hb_012662_010 Hb_006061_010 Hb_006061_010 Hb_166511_010--Hb_006061_010 Hb_000313_320 Hb_000313_320 Hb_166511_010--Hb_000313_320 Hb_011616_030 Hb_011616_030 Hb_166511_010--Hb_011616_030 Hb_001135_230--Hb_000205_170 Hb_001135_230--Hb_002099_020 Hb_003058_050 Hb_003058_050 Hb_001135_230--Hb_003058_050 Hb_011037_010 Hb_011037_010 Hb_001135_230--Hb_011037_010 Hb_092027_010 Hb_092027_010 Hb_001135_230--Hb_092027_010 Hb_076693_010 Hb_076693_010 Hb_001135_230--Hb_076693_010 Hb_027751_030 Hb_027751_030 Hb_000614_330--Hb_027751_030 Hb_002843_190 Hb_002843_190 Hb_000614_330--Hb_002843_190 Hb_027751_040 Hb_027751_040 Hb_000614_330--Hb_027751_040 Hb_000538_150 Hb_000538_150 Hb_000614_330--Hb_000538_150 Hb_000284_160 Hb_000284_160 Hb_000614_330--Hb_000284_160 Hb_026766_010 Hb_026766_010 Hb_000614_330--Hb_026766_010 Hb_010770_010 Hb_010770_010 Hb_012404_030--Hb_010770_010 Hb_007805_020 Hb_007805_020 Hb_012404_030--Hb_007805_020 Hb_010979_010 Hb_010979_010 Hb_012404_030--Hb_010979_010 Hb_000214_090 Hb_000214_090 Hb_012404_030--Hb_000214_090 Hb_095853_010 Hb_095853_010 Hb_012404_030--Hb_095853_010 Hb_068347_010 Hb_068347_010 Hb_012404_030--Hb_068347_010
Green: transcription factors, Orange: rubber biosynthesis, Blue: desease resistance

Expression pattern by RNA-Seq analysis

RRIM600_Latex RRIM600_Bark RRIM600_Leaf RRIM600_Petiole PB350_Latex RRIM901_Latex
0.068208 0 0 0 0.0119336 0
RRII105_Latex_C RRII105_Latex_S RRIM928_Latex RRIM928_Bark RRIM928_Leaf
0.0271093 0 0 0.00850029 0

CAGE analysis